Phyre 2 alignment of P11988 with c3mmwB

Job Description P11988
Confidence 99.92% Date Thu Jan 5 11:33:02 GMT 2012

Rank 62 Aligned Residues 257

% Identity 16% Template c3mmwB_

PDB info PDB header:hydrolase Chain: B: PDB Molecule:endoglucanase; PDBTitle: crystal structure of endoglucanase cel5a from the hyperthermophilic2 thermotoga maritima

Resolution 1.85 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	N	R	A	V
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence	D	E	F	F	D	I	I	K	E	A	G	F	S	H	V	R	I	P	I	R	W	S	T	H	A	Y	A	F	P	P	Y	K	I	M	D	R	F	F	K	R	V	D	E	V	I	N	G	A	L	K	R	G	L	A	V	V	I	N	I	H	H	Y	E	E	L	M	.	.	.	.	.	.	.	.	N	D	P	E	E	H
Template Known Secondary structure	T	T								T	T										G	G	G	G	B		S	S	T	T			B																		T	T															.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
	36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.

	146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	.	.	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G
Query Conservation																			.	.
Alig confidence																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	K	E	R	F	L	A	L	W	K	Q	I	A	D	R	Y	K	D	Y	P	E	T	L	F	F	E	I	L	N	E	P	H	G	N	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	K	W	N	E	L	L	E	E	A	L	K	V	I	R	S	I	D	K	K	H	T	I	I
Template Known Secondary structure																T	T	S		T	T							S	S			T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

	224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	I	G	T	A	E	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	S	A	L	E	K	L	S	V	P	K	W	E	K	N	S	I	V	T	I	H	Y	Y	N	P	F
Template Known Secondary structure				S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T	G	G	G					T	T			S										S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	168	.	170	.	.	.	.																																															.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

	304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	Q	K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A
Query Conservation
Alig confidence																															.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence	E	F	T	H	Q	G	A	E	W	V	E	G	S	E	K	W	L	G	R	K	W	G	S	P	D	D	Q	K	H	L	.	.	.	.	.	.	I	E	E	F	N	F	I	E	E	W	S	K	K	N	K	R	P	I	Y	I	G	E	F	G	A	Y	R	K	A	D	.	.	.	.	.	.	.	.	L	E	S	R	I	K
Template Known Secondary structure				T	T	T		T	T	S	T	T	G	G	G	G	T	T					S								.	.	.	.	.	.															T												T	T	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
	202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.									.	.	.	.	.	.

	384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	A
Query Conservation
Alig confidence													.	.	.			.	.	.
Template Conservation													.	.	.			.	.	.
Template Sequence	W	T	S	F	V	V	R	E	M	E	K	R	.	.	.	R	W	.	.	.	S	W	A	Y	W	E	F	C	S	G	F	G	V
Template Known Secondary structure											T	T	.	.	.	T		.	.	.					S		S	S	S	T	T
Template Predicted Secondary structure													.	.	.			.	.	.
Template SS confidence
	268	.	270	.	.	.	.	.	.	.	.	.				280	.				.	.	.	.	.	.	.	.	290	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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