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Job DescriptionP11988
Confidence99.79%DateThu Jan 5 11:33:02 GMT 2012
Rank80Aligned Residues265
% Identity15%Templatec3l55B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:b-1,4-endoglucanase/cellulase; PDBTitle: crystal structure of a putative beta-1,4-endoglucanase /2 cellulase from prevotella bryantii
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110.........120...... ...130.........140..
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Query Sequence  PEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSH. . . YEMPYGLVKNYGGWAN
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Template Sequence  QDXXTFLXQNGFNAVRIPVTWYEHXDA. . EGNVDEAWXXRVKAIVEYAXNAGLYAIVNVHHDTAAGSGAWIKA. . DTDVY
Template Known Secondary structure  TT



GGGB
T..T

B
T


TTBSSSTT

B
S..S
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   55....60.........70.........80. ........90.........100.........110.........120..... ....130
 
   143......150.........160... ......170.........180.........190.........200.........210.........220
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Query Sequence  RAVIDHFEHYARTVFTRYQHK. . VALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEA
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Template Sequence  AATKEKFKKLWTQIANALADYDQHLLFEGYNEXLD. . . . . . . GNNSWDEPQKASGYEALNNYAQDFVDAVRATGGNNATR
Template Known Secondary structure  TTTS
TT

S



.......TT

SSS
SSTT
GGGGT
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   131........140.........150.........160..... ....170.........180.........190.........200...
 
   221........230.........240.........250.........260.........270.........280.........290.........300
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Query Sequence  KIGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYY
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Template Sequence  NLIVNTYAAAKGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NVLNNFXLPTDA. . . . . . . . VNNHLIVQVHSY
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GGG


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S........SSS

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   204.....210...... ...220........ .230.........240
 
   301........310.........320.........330.........340.........350..... ....360.........370.........
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Query Sequence  MTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQK. PLFIVENGLGAKDSVEADGSIQDD
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Template Sequence  D. . . . . . . . . . . . . . . . . . . . . . PWNFFNTKTTWDSECHNTLTEIFSALSKKFTTIPYIIGEYGTHGESDISVSKSSPAE
Template Known Secondary structure 
......................STT
SS


SSS

S

GGG



TTS
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   241 ........250.........260.........270.........280.........290........
 
   380.........390.........400.........
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Query Sequence  YRIAYLNDHLVQVNEAIADGVDIMGYTSWG
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Template Sequence  KIKLAADQAADXVKLAKDHHS. . . ATFYWX
Template Known Secondary structure  TT
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   299300.........310......... 320.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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