Job Description P11988 Confidence 93.18% Date Thu Jan 5 11:33:02 GMT 2012 Rank 175 Aligned Residues 96 % Identity 21% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																	.																																																										.	.	.	.	.	.	.
Query SS confidence																	.																																																										.	.	.	.	.	.	.
Query Sequence		W	Q	E	D	G	K	G	I	S	T	S	D	L	Q	P	.	H	G	V	M	G	K	M	E	P	R	I	L	G	K	E	N	I	K	D	V	A	I	D	F	Y	H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q	G	D	.	.	.	.	.	.	.
Query Conservation																	.																																																										.	.	.	.	.	.	.
Alig confidence																	.																			.	.																												.	.	.	.							.	.	.	.	.	.	.
Template Conservation																																				.	.																												.	.	.	.
Template Sequence		W	T	A	L	T	A	S	P	D	T	W	D	E	T	K	R	A	D	I	S	Y	Q	L	L	L	Y	S	F	A	D	S	D	G	D	.	.	G	Y	G	D	L	N	G	V	T	Q	K	L	D	Y	L	N	Q	L	G	V	K	A	L	W	L	S	P	.	.	.	.	I	H	P	C	X	S	Y	H	G	Y	D	V	T
Template Known Secondary structure														S				S								T	T	T	S			S	S	S	S	.	.	S	S								T	T							T	T		S							.	.	.	.		S		B	S	S	T	T			S	B	S
Template Predicted Secondary structure																																				.	.																												.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.
					95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		D	Y	T	K	V	N	P	Q	L	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K	I	Y	L	D	Y
Template Known Secondary structure			T	T	S			T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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