Return to main results Retrieve Phyre Job Id

Job DescriptionP11988
Confidence99.85%DateThu Jan 5 11:33:02 GMT 2012
Rank75Aligned Residues254
% Identity16%Templatec3icgD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:endoglucanase d; PDBTitle: crystal structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  PEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAV
Query Conservation   


 

  

   









 
 
     
  

  
  


 
   

 




 
 
 
  
    


     
Alig confidence 




























































..






..







Template Conservation     
  
   


 




                  
  

 

  
   

 



 
 ..       ..        
Template Sequence  HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHH. . ENEWLKP. . FYANEAQV
Template Known Secondary structure  T





TTSB

TTT

B
TTT


S..
TTT


..S
Template Predicted Secondary structure 


















..






..




Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100........ .110..... ....120...
 
   146...150.........160... ......170.........180.........190.........200.........210.........220...
Predicted Secondary structure 


..




















Query SS confidence 

















. .



























































Query Sequence  IDHFEHYARTVFTRYQHK. . VALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKIG
Query Conservation 
  
  

      



..
  
 
 


                             
 

  
    
       

Alig confidence 

















..











......









































Template Conservation         
  

 


    
  


 


  ......                            



   
    

Template Sequence  KAQLTKVWTQIANNFKKYGDHLIFETMNEPRP. . . . . . VGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIM
Template Known Secondary structure  TTT

TTS
SS


......S
GGGTTS


T
GGGGTS
Template Predicted Secondary structure 











......


















Template SS confidence 















































































   124.....130.........140.........150..... ....160.........170.........180.........190.......
 
   224.....230.........240.........250.........260.........270.........280.........290... ......
Predicted Secondary structure 































....

Query SS confidence 





































































. . . .





Query Sequence  NMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVD. . . . FISFSY
Query Conservation 
        
      
  

           
 
  
 

                
  
    
 
 
....





Alig confidence 






.................................................













....





Template Conservation 
 
    .................................................           
  
 


   
 
Template Sequence  VPTLAAS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AMSTTINDLVIPNNDSKVIVSLHM
Template Known Secondary structure 
GGG
.................................................
S


GGG
TT
Template Predicted Secondary structure 





.................................................
















Template SS confidence 















































































   198.200.... .....210.........220........
 
   300.........310.........320.........330.........340.........350... ......360.........370......
Predicted Secondary structure 


































...

















Query SS confidence 





















































. . .






















Query Sequence  YMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRY. . . QKPLFIVENGLGAKDSVEADGSI
Query Conservation 

   
                         
  

 
 
 

   
      
...  

 




    
     
 
Alig confidence 












..................






















...















.......
Template Conservation 
 
  
       ..................                          



 




      .......
Template Sequence  YSPYFFAMDINGT. . . . . . . . . . . . . . . . . . SSWGSDYDKSSLDSEFDAVYNKFVKNGRAVVIGEMGSINKNN. . . . . . .
Template Known Secondary structure 

ST
TTS
..................S


STGGGT





SS
.......
Template Predicted Secondary structure 











..................




















.......
Template SS confidence 















































































   229230.........240. ........250.........260.........270.........280...
 
   377..380.........390.........400.........410
Predicted Secondary structure 




Query SS confidence 

































Query Sequence  QDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGP
Query Conservation   
  
  

   
  
  

 


 
 

  


Alig confidence  .

















......








Template Conservation  .      
       
   ......
     
  
Template Sequence  . TAARVTHAEYYAKSAKAR. . . . . . GLTPIWWDN
Template Known Secondary structure  .TT......T

Template Predicted Secondary structure  .

......





Template SS confidence 

































   284.....290.........300. ........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions