Job Description P11988 Confidence 98.66% Date Thu Jan 5 11:33:02 GMT 2012 Rank 119 Aligned Residues 280 % Identity 15% Template c3f55A_ PDB info PDB header:hydrolase, allergen Chain: A: PDB Molecule:beta-1,3-glucanase; PDBTitle: crystal structure of the native endo beta-1,3-glucanase (hev b 2), a2 major allergen from hevea brasiliensis (space group p41) Resolution 2.80 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	N	R	A	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		S	E	V	I	A	L	Y	K	K	S	N	I	T	R	M	R	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	N	.	.	.	.	.	.	.	Q	A	V	L	E	A	L	R	G	S	N	I	E	L	I	L	G	V	P	.	.	.	.	.	.	.	.	N	S	D	L	Q	S	L	T	N	P	S	N
Template Known Secondary structure												T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	S			.	.	.	.	.	.	.							T	T	T											.	.	.	.	.	.	.	.	T	T	T	T	T	G	G	G	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.														.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.
Predicted Secondary structure																											.																																																			.	.
Query SS confidence																											.																																																			.	.
Query Sequence		I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	V	A	L	W	L	T	F	.	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	.	.	K	I
Query Conservation																											.																																																			.	.
Alig confidence								.	.																		.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	S	W	V	Q	.	.	K	N	V	R	G	F	W	S	S	V	R	F	R	Y	I	A	V	G	N	E	I	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	R	G	T	A	W	L	A	Q	F	V	L	P	A	M	R	N	I	H	D	A	I	R	S	A	G	L	Q	D	Q	I	K	V
Template Known Secondary structure								.	.			T	T	T	T	T	T	T	T	T									S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T	T					T	T															T	T		T	T	T	S
Template Predicted Secondary structure								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	A	I	D	L	T	L	V	G	N	S	Y	P	P	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	R	D	D	V	R	S	Y	L	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	R	F	L	S	S	I	R	S	P	L	L	A	N	I	Y	P	Y
Template Known Secondary structure							S	S	S					S	S	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																		150	.	.	.	.	.	.	.	.	.	160	.															.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	.	.	.	.	.	.	Q	K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																			.	.	.	.														.																	.	.	.	.	.	.																					.	.	.
Template Conservation																			.	.	.	.														.																																											.	.	.
Template Sequence		F	T	Y	A	G	N	P	R	D	I	S	L	P	Y	A	L	F	.	.	.	.	T	S	P	S	V	V	V	W	D	G	Q	R	G	.	Y	K	N	L	F	D	A	T	L	D	A	L	Y	S	A	L	E	R	A	S	G	G	S	L	E	V	V	V	S	E	S	G	W	P	S	A	G	A	F	A	A	T	.	.	.
Template Known Secondary structure								T	T	T	S						T	T	.	.	.	.			S	S		S				T	T			.			S															T	T	T		T	T												S	S	S	S	T	T			.	.	.
Template Predicted Secondary structure																			.	.	.	.														.																																											.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.						.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	.	.	.	.	.	G	Y	T	S	W	G	P	I	D	L	V	S	A	S	H	S	Q	M	S	K	R	Y	G	F	I	Y	V	D	R	D	D	N	G	E	G	S	L	T	R	T	R	K
Query Conservation																													.	.	.	.	.
Alig confidence		.	.	.	.	.																							.	.	.	.	.											.																		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																						.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	F	D	N	G	R	T	Y	L	S	N	L	I	Q	H	V	K	R	G	T	P	K	R	P	K	R	A	I	E	T	Y	L	F	A	M	F	D	E	.	N	K	K	Q	P	E	V	E	K	H	F	G	L	F	F	P	N	.	.	.	.	.	.	.	.	.	.	K	W	Q	K
Template Known Secondary structure		.	.	.	.	.															T	T	S			S	S	S		S	S									S	B			.	T	T	S	S	S	G	G	G	G				S	B		T	T	.	.	.	.	.	.	.	.	.	.	S		B	S
Template Predicted Secondary structure		.	.	.	.	.																																						.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
							253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.											.	.	.	310

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions