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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank15Aligned Residues447
% Identity30%Templatec3ai0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of beta-glucosidase from termite neotermes2 koshunensis in complex with para-nitrophenyl-beta-d-glucopyranoside
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKAFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCL
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Template Sequence  VYTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEH. . . . . PDYVVDGATGDIADDSYHLYKEDVKILKELGAQVY
Template Known Secondary structure  TTB

TT





TTGGG


B
.....GGGSGGG

SSSTT
T
S
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   28.30.........40.........50.........60....... ..70.........80.........90.........100..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  RISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRY
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Template Sequence  RFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQAL. QDLGGWPNLVLAKYSENYARVLFKNF
Template Known Secondary structure 

STTSSTT


TT
SS

B.TTTSTTST
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   103......110.........120.........130.........140.........150..... ....160.........170.........180.
 
   161........170.........180......... 190.........200.........210....... ..220.........230.....
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Query Sequence  QHKVALWLTFNEINMSLHAPFTGVGLAEE. . SGEAEVYQAIHHQLVASARAVKACHSLL. . . PEAKIGNMLLGGLVYPLT
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Template Sequence  GDRVKLWLTFNDPLTFMDGYASEIGMAPSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPAT
Template Known Secondary structure  TTT


GGGGB
TTSSTT

B
TTTT



SS
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   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   236...240....... ..250......... 260.........270.... .....280.........290.........300....
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Query Sequence  CQPQDMLQAMEE. NRRWMFFGDVQA. . RGQYPGYMQRFFRDH. . . . . . . . NITIEMTESDAEDLKHTVDFISFSYYMTGC
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Template Sequence  NSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALL
Template Known Secondary structure  SSTSSS
SS
TT
SS
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TT

S


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   262.......270.........280.........290.........300.........310.........320.........330.........340.
 
   305....310. ........320.........330..... ....340.........350... ......360.........370.........380
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Query Sequence  VSHDESI. . NKNAQGNILNMIPNPHLKSSEWGW. QIDPVGLRVLLNTLWDRY. QKPLFIVENGLGAKDSVEADGSIQDDY
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Template Sequence  GKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFS. . . . . . DYGGLNDTG
Template Known Secondary structure  SS

S
SS
T


TTS


SSTT



TS





......BSS
S

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   342.......350.........360.........370.........380.........390.........400...... ...410.....
 
   381........390...... ...400.........410.........420.........430.........440.........450.........
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Query Sequence  RIAYLNDHLVQVNEAI. ADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTRG
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Template Sequence  RVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRG. YSEKFGIYAVDFEDP. . . ARPRIPKESAKVLAEIMNTRK
Template Known Secondary structure  TT



SB



GGGT.TSSB

S
TTST...T


TB
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   416...420.........430.........440.........450..... ....460.........470 .........480.........490.
 
   460...
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Query Sequence  LSLK
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Template Sequence  IPER
Template Known Secondary structure 

GG
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   492...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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