Job Description P11988 Confidence 100.00% Date Thu Jan 5 11:33:02 GMT 2012 Rank 27 Aligned Residues 440 % Identity 31% Template c3ahyD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of beta-glucosidase 2 from fungus trichoderma reesei2 in complex with tris Resolution 1.63 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	E	T	F	L	W	G	G	A	T	A	A	N	Q	V	E	G	A	W	Q	E	D	G	K	G	I	S	T	S	D	L	Q	P	H	G	V	M	G	K	M	E	P	R	I	L	G	K	E	N	I	K	D	V	A	I	D	F	Y	H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S
Query Conservation
Alig confidence																																					.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		L	P	K	D	F	Q	W	G	F	A	T	A	A	Y	Q	I	E	G	A	V	D	Q	D	G	R	G	P	S	I	W	D	T	F	C	A	.	.	.	.	.	.	Q	P	G	K	I	A	D	G	S	S	G	V	T	A	C	D	S	Y	N	R	T	A	E	D	I	A	L	L	K	S	L	G	A	K	S	Y	R	F	S
Template Known Secondary structure		B		T	T																T	T	S	T	T				B							T	.	.	.	.	.	.	S	T	T	S	S	T	T	S			S	S	S	T	T		G	G	G												T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure														.																																																.
Query SS confidence														.																																																.
Query Sequence		I	A	W	A	R	I	F	P	Q	G	D	E	.	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	N	.	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q
Query Conservation														.																																																.
Alig confidence														.																																																.																			.
Template Conservation																																																																																	.
Template Sequence		I	S	W	S	R	I	I	P	E	G	G	R	G	D	A	V	N	Q	A	G	I	D	H	Y	V	K	F	V	D	D	L	L	D	A	G	I	T	P	F	I	T	L	F	H	W	D	L	P	E	G	L	H	Q	R	Y	G	G	L	L	N	R	T	E	F	P	L	D	F	E	N	Y	A	R	V	M	F	R	A	L	.
Template Known Secondary structure								S	S	S		S	T	T	S																				T	T									S	S			B									G	G	G		T	T																		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.
Predicted Secondary structure																														.																											.	.	.	.																				.
Query SS confidence																														.																											.	.	.	.																				.
Query Sequence		H	K	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	.	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	.	.	.	.	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	.	T
Query Conservation																														.																											.	.	.	.																				.
Alig confidence																														.																											.	.	.	.																				.
Template Conservation
Template Sequence		P	K	V	R	N	W	I	T	F	N	E	P	L	C	S	A	I	P	G	Y	G	S	G	T	F	A	P	G	R	Q	S	T	S	E	P	W	T	V	G	H	N	I	L	V	A	H	G	R	A	V	K	A	Y	R	D	D	F	K	P	A	S	G	D	G	Q	I	G	I	V	L	N	G	D	F	T	Y	P	W	D	A
Template Known Secondary structure		T	T																			T	S		S	S	T	T					S	S																								T	S		S	S	S	S															S	S	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		C	Q	P	Q	D	M	L	Q	A	M	E	E	.	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N
Query Conservation														.
Alig confidence														.																												.	.
Template Conservation																																										.	.
Template Sequence		A	D	P	A	D	K	E	A	A	E	R	R	L	E	F	F	T	A	W	F	A	D	P	I	Y	L	G	D	Y	P	A	S	M	R	K	Q	L	G	D	R	.	.	L	P	T	F	T	P	E	E	R	A	L	V	H	G	S	N	D	F	Y	G	M	N	H	Y	T	S	N	Y	I	R	H	R	S	S	P	A	S	A
Template Known Secondary structure		T																T										S	S										G	G	G	.	.	S												T	T			S	S															S	S				T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		315	.	.	.	.	320								.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																																			.																		.	.
Query SS confidence								.	.	.	.	.	.	.																																			.																		.	.
Query Sequence		A	Q	G	N	I	L	.	.	.	.	.	.	.	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	Q	.	K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	.	.	A	D	G	S	I	Q	D	D	Y	R	I	A	Y
Query Conservation								.	.	.	.	.	.	.																																			.																		.	.
Alig confidence								.	.	.	.	.	.	.																																			.																		.	.
Template Conservation
Template Sequence		D	D	T	V	G	N	V	D	V	L	F	T	N	K	Q	G	N	C	I	G	P	E	T	Q	S	P	W	L	R	P	C	A	A	G	F	R	D	F	L	V	W	I	S	K	R	Y	G	Y	P	P	I	Y	V	T	E	N	G	T	S	I	K	G	E	S	D	L	P	K	E	K	I	L	E	D	D	F	R	V	K	Y
Template Known Secondary structure		T			S	S	S					S	B		T	T			B	S					S	S	T	T																				T	S													T	T	G	G	G	S						T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	N	D	H	L	V	Q	V	N	E	A	I	A	.	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	A	S	H	S	Q	M	S	K	R	Y	G	F	I	Y	V	D	R	D	D	N	G	E	G	S	L	T	R	T	R	K	K	S	F	G	W	Y	A	E	V	I	K	T
Query Conservation															.
Alig confidence															.																							.																.	.	.	.
Template Conservation																																						.																.	.	.	.
Template Sequence		Y	N	E	Y	I	R	A	M	V	T	A	V	E	L	D	G	V	N	V	K	G	Y	F	A	W	S	L	M	D	N	F	E	W	A	D	G	.	Y	V	T	R	F	G	V	T	Y	V	D	Y	E	N	G	.	.	.	.	Q	K	R	F	P	K	K	S	A	K	S	L	K	P	L	F	D	E
Template Known Secondary structure															T	T												S	S					G	G	G	T	.	T	S	S				S					T	T	T	T	.	.	.	.	T
Template Predicted Secondary structure																																						.																.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.					.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.