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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank28Aligned Residues444
% Identity29%Templatec2zoxA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytosolic beta-glucosidase; PDBTitle: crystal structure of the covalent intermediate of human cytosolic2 beta-glucosidase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  AFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRI
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Template Sequence  AFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTH. . . . . QGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRF
Template Known Secondary structure  B

TT





TTGGG


B.....T
TTSSGGG

SSSTT
TTT
T
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   2.......10.........20.........30....... ..40.........50.........60.........70......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  SIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQH
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Template Sequence  SLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ. GGWLSEAIIESFDKYAQFCFSTFGD
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STTSSTTS

TT
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BT.TGGGSTTT
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   77..80.........90.........100.........110.........120.........130 .........140.........150.....
 
   163......170.........180......... 190.........200.........210.........220. ........230.......
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Query Sequence  KVALWLTFNEINMSLHAPFTGVGLAEE. . SGEAEVYQAIHHQLVASARAVKACHSLLPEAK. . . IGNMLLGGLVYPLTCQ
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Template Sequence  RVKQWITINQANVLSVMSYDLGMFPPGIPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPN
Template Known Secondary structure  T

TTTS

STT



TTTT


SSTT
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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   238.240....... ..250........ .260.........270.... .....280.........290.........300......
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Query Sequence  PQDMLQAMEE. . NRRWMFFGDVQ. ARGQYPGYMQRFFRDH. . . . . . . . NITIEMTESDAEDLKHTVDFISFSYYMTGCVS
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Template Sequence  SVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIK
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TTTSS

TT
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TT

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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   307..310...... ...320.........330.........340.........350...... ...360.........370.........380..
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Query Sequence  HDESINKNAQ. . . GNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKP. LFIVENGLGAKDSVEADGSIQDDYRI
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Template Sequence  YQENKKGELGILQDAEIEFFPDPSWKNVDWIY. VVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDP. . . . APLDDTQRW
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TT


ST

TTS
TT.

TTTS





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   316...320.........330.........340....... ..350.........360.........370.........380. ........390
 
   383......390....... ..400.........410.........420.........430.........440.........450.........460.
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Query Sequence  AYLNDHLVQVNEAIA. DGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTRGLS
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Template Sequence  EYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQG. YSSRFGLFHVDFEDP. . . ARPRVPYTSAKEYAKIIRNNGLE
Template Known Secondary structure  TS



SB



GGGG.GG

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   391........400.........410.........420........ .430.........440... ......450.........460......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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