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Job DescriptionP11988
Confidence86.07%DateThu Jan 5 11:33:02 GMT 2012
Rank217Aligned Residues93
% Identity16%Templatec2ya1A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative alkaline amylopullulanase; PDBTitle: product complex of a multi-modular glycogen-degrading2 pneumococcal virulence factor spua
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80..... ....90.........100.. .......110....
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Query Sequence  IALFAEMGFTCLRISIA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WARIFPQGDEVEPNEAG. LAFYDRLFDEMA
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Template Sequence  LDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIH
Template Known Secondary structure  T
SS

B
BSS
BGGGTTS


S

SSS
S


S
SBS
SSSB
STT
S
TT
TT
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   622.......630.........640.........650.........660.........670.........680.........690.........700.
 
   115....120..... ....130........ .140.........150.........160.
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Query Sequence  QAGIKPLVTLS. . HYEMPYGLVKNYG. . . . . . . . . . . . . . . . . . . . . GWANRAVIDHFEHYARTVFTRYQ
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Template Sequence  KRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDTYK
Template Known Secondary structure  TTT

TT

S
TTSTTTSB
B
TT

B
TT
B
TTS
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   702.......710.........720.........730.........740.........750.........760.........770.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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