Return to main results Retrieve Phyre Job Id

Job DescriptionP11988
Confidence98.99%DateThu Jan 5 11:33:02 GMT 2012
Rank112Aligned Residues134
% Identity14%Templatec2y8kA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:carbohydrate binding family 6; PDBTitle: structure of ctgh5-cbm6, an arabinoxylan-specific xylanase.
Resolution1.47 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PEDIALFAEMGFTCLRISIAWA. RIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRA
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Template Sequence  YDQIARVKELGFNAVHLYAECFDPRYPAPG. SKAPGYAVNEIDKIVERTRELGLYLVITIGNGAN. . . . . . . . . . . NGNH
Template Known Secondary structure  GGGGGGT



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Query Sequence  VIDHFEHYARTVFTRYQHK. . VALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKI
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Template Sequence  NAQWARDFWKFYAPRYAKETHV. LYEIHNEPVAWGPPYSSSTANPPG. . . . . . . . . . . . AVDMEIDVYRIIRTYAPETPV
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   143......150.........160.... .....170.........180........ .190.........200.........
 
   223.
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Query Sequence  GN
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Template Sequence  LL
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   210.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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