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Job DescriptionP11988
Confidence80.32%DateThu Jan 5 11:33:02 GMT 2012
Rank238Aligned Residues156
% Identity10%Templatec2xvgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha xylosidase; PDBTitle: crystal structure of alpha-xylosidase (gh31) from2 cellvibrio japonicus
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70...... ...80.........90.........100.........110.........120.........130........
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Query Sequence  YPEDIALFAEMG. . FTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYG. . . .
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Template Sequence  IIQNLKEYRDRKIPIDNIVLDWSYWPEDAWG. SHDFDKQFFPDPKALVDKVHAMNAQIMISVWPKFYPTTDNYKELNAKG
Template Known Secondary structure  TT




S

S
TT
TT.S



TTT
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TT


S
TTSTT
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   450.........460.........470.........480 .........490.........500.........510.........520........
 
   139140.........150.........160.........170.........180.........190....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . GWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAE
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Template Sequence  FMFNRNLDEKNLDWIGKGYLNAFYDPFSPEATAIFWKQIRDKINVHG. FDAWWLDAVEPDIHSNLTFEKRKWLMTPNARG
Template Known Secondary structure 
TTT
B
SSTT

B


SSTGGGT.



TTT
SSTT

T
SBTTB
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   529530.........540.........550.........560.........570..... ....580.........590.........600.......
 
   195....200.. .......210.........220..
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Query Sequence  VYQAIHHQ. . LVASARAVKACHSLLPEAKI
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Template Sequence  NGAEIFNAYAVPHAEGVYQGELATDGDKRS
Template Known Secondary structure 
SGGGTTTT
TTB

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   608.610.........620.........630.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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