Job Description P11988 Confidence 30.60% Date Thu Jan 5 11:33:02 GMT 2012 Rank 319 Aligned Residues 148 % Identity 11% Template c2xn1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase; PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris Resolution 2.30 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.													.	.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.													.	.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q	G	.	.	.	.	D	E	V	E	P	N	E	A	G	L	A	F	.	.	.	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.													.	.	.																						.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.									.	.			.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.
Template Sequence		D	K	L	K	T	I	V	D	K	A	K	K	L	G	L	E	M	F	V	L	D	D	G	W	F	G	H	R	D	D	D	N	S	S	L	G	D	W	K	V	Y	K	K	.	.	K	F	P	N	G	L	G	H	F	A	D	Y	V	H	E	Q	G	L	K	F	G	L	W	F	E	P	E	M	I	S	Y	E	S	N	L
Template Known Secondary structure															T								T	T	S	B	T	T		S	S	T	T	S		T	T			S	B		T	T	.	.	T		T	T												T	T									T	T				S	S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
			127	.	.	130	.	.	.	.	.	.	.	.													.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.													.	.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence		.													.	.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		.	Y	E	M	P	Y	G	L	V	K	N	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	V	A	L	.	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E
Query Conservation		.													.	.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.	.	.																								.	.				.																		.	.	.	.	.	.	.	.
Template Conservation																																																		.	.																						.	.	.	.	.	.	.	.
Template Sequence		Y	K	E	H	P	D	Y	L	M	H	V	P	G	R	K	P	C	P	S	R	N	Q	Y	V	L	E	L	G	R	K	E	V	R	D	N	I	F	E	Q	M	V	K	I	L	D	S	K	K	.	.	I	D	Y	I	K	W	D	M	N	R	S	L	S	D	I	Y	E	S	D	L	P	.	.	.	.	.	.	.	.	A
Template Known Secondary structure						G	G	G	B				T	T	S					B	T	T	B			B		T	T	S																T	T	S		.	.										S				S				T	T	S		.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																																		.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.			.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.									.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	Q	G	E	A	Y	H	R	Y	V	L	G	Y	Y	D	L	L	N	K	L	V	T	R	Y	P	D	I	L	F
Template Known Secondary structure		G	G	G	G	G																					T	T	S
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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