Job Description P11988 Confidence 96.95% Date Thu Jan 5 11:33:02 GMT 2012 Rank 145 Aligned Residues 142 % Identity 18% Template c2xfyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-amylase; PDBTitle: crystal structure of barley beta-amylase complexed with2 alpha-cyclodextrin Resolution 1.21 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.												.	.	.	130	.	.
Predicted Secondary structure																																																														.			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	.	S	H	.	.	.	.	.	.	.	.	.	.	.	Y	E	M	P	Y	G
Query Conservation																																																														.			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.								.	.	.																					.			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.								.	.	.
Template Sequence		L	R	A	Q	L	R	K	L	V	E	A	G	V	D	G	V	M	V	D	V	W	W	G	L	V	E	G	K	G	.	P	K	A	Y	D	W	S	.	.	.	A	Y	K	Q	L	F	E	L	V	Q	K	A	G	L	K	L	Q	A	I	M	S	F	H	Q	C	G	G	N	V	G	D	A	V	N	I	P	I	P	Q	W
Template Known Secondary structure												T	T														T		S	S	.	T	T						.	.	.												T	T										S		B			S	T	T		S			B		S
Template Predicted Secondary structure																															.								.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	N	Y	G	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A
Query Conservation
Alig confidence						.	.								.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.								.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	D	V	.	.	G	T	R	D	P	D	I	.	.	.	.	.	.	.	.	.	F	Y	T	D	G	H	G	T	R	N	I	E	Y	L	T	L	.	.	.	.	.	.	.	.	.	.	.	.	G	V	D	N	Q	P	L	F	H	G	R	S	A	V	Q	M	Y	A	D	Y	M	T	S	F	R	E	N	M	K	E
Template Known Secondary structure						.	.					G	G	G	.	.	.	.	.	.	.	.	.					T	T										G	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T				B	T	T	B
Template Predicted Secondary structure						.	.								.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.			.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.													.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		213	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		C	H	S	.	.	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		F	L	D	A	G	V	I	V	D	I	E	V	G	L	G	P	A	G	E	M	R	Y	P
Template Known Secondary structure					T	T										S	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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