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Job DescriptionP11988
Confidence99.63%DateThu Jan 5 11:33:02 GMT 2012
Rank91Aligned Residues320
% Identity14%Templatec2w5fB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:endo-1,4-beta-xylanase y; PDBTitle: high resolution crystallographic structure of the2 clostridium thermocellum n-terminal endo-1,4-beta-d-3 xylanase 10b (xyn10b) cbm22-1-gh10 modules complexed with4 xylohexaose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRIS
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Template Sequence  YANYFRVGSVLNSGTVNN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SSIKA. . LILREFNSITCENE
Template Known Secondary structure  TTTT

TTTTT
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SSST
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   199200.........210...... ...220. ........230.....
 
   84.....90.... .....100.........110.........120 .........130... ......140.........150
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Query Sequence  IAWARIFPQGD. . . . . . EVEPNEAGLAFYDRLFDEMAQAGIKP. . LVTLSHYEMPYGL. . . . . VKNYGGWANRAVIDHFE
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Template Sequence  MKPDATLVQSGSTNTNIRVSLNRA. . . . . ASILNFCAQNNIAVRGHTLVWHSQTPQWFFKDNFQDNGNWVSQSVMDQRLE
Template Known Secondary structure  TSTT

TTT.....TT

SSS

GGGGBTTSSTTS
B

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   236...240.........250......... 260.........270.........280.........290.........300.........310
 
   151........160... ......170... ......180.........190.........200.........210........ .220.
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Query Sequence  HYARTVFTRYQHK. . . . . VALWLTFNEI. . . NMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLP. EAK
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Template Sequence  SYIKNMFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNKFIEKAFTYARKYAPANCK
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TTS
S
B
S
STTB

BSSBTTBBSSTTS
TT
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   311........320.........330.........340.........350.........360.........370.........380.........390
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  IGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYM
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Template Sequence  LYYNDYNE. . . . YWDHKRDCIASICANLYN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KGLLDGVGMQSHI
Template Known Secondary structure  SST....TS.....................................TT




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   391....... .400.........410...... ...420.........
 
   302.......310.........320.........330.........340.........350.........360.........370.........380.
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Query Sequence  TGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYR
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Template Sequence  NADMNGFSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . IQNYKAALQKY. INIGCDVQITELDISTENGKF. . . . . SLQQQ
Template Known Secondary structure  S
SSSTT
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   430........ .440......... 450.........460.........470 .....
 
   382.......390.........400. ........410.........420.........430.........440.........450........
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Query Sequence  IAYLNDHLVQVNEAIADGVD. . IMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTR
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Template Sequence  ADKYKAVFQAAVDINRTSSKGKVTAVCVWGPNDANTWLGS. . QNAPLLFNANNQ. . . . . . . . . . PKPAYNAVASIIPQS
Template Known Secondary structure 

SS
SSSSTTS
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G..GG

SSB
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   476...480.........490.........500.........510..... ....520....... ..530.........540..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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