 |
Job Description | P11988 | Confidence | 43.70% | Date | Thu Jan 5 11:33:02 GMT 2012 |
Rank | 290 | Aligned Residues | 112 |
% Identity | 13% | Template | c2qmjA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:maltase-glucoamylase, intestinal; |
PDBTitle: crystral structure of the n-terminal subunit of human maltase-2 glucoamylase in complex with acarbose
|
Resolution | 1.90 Å |
|
 |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
Y | P | E | D | I | A | L | F | A | E | M | G | F | . |
. |
T | C | L | R | I | S | I | A | W | A | R | I | F | P | Q | G | D | E | V | E | P | N | E | A | G | L | A | F | Y | D | R | L | F | D | E | M | A | Q | A | G | I | K | P | L | V | T | L | S | H | Y | E | M | P | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |
|
|
|   |
|
|   |   |
|
|   | . | . |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   | . | . | . |
|
|   |
|   |   |   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
M | R | E | V | V | E | R | N | R | A | A | Q | L | P | Y | D | V | Q | H | A | D | I | D | Y | M | D | E | R | R | D | . |
. |
. |
F | T | Y | D | S | V | D | F | K | G | F | P | E | F | V | N | E | L | H | N | N | G | Q | K | L | V | I | I | V | D | P | A | I | S | N | N | S | S | S | S | K | P | Y | G | P | Y | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |
| G | G | G | S | B | T | T | B | T | . | . | . | T |
|
|
| T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S |
|  |  |
|
|
|
| S | S | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | |
|
|
. | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
132 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
G | L | V | K | N | Y | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | W | A | N | R | A | V | I | D | H | F | E | H | Y | A | R | T | V | F | T | R | Y | Q | H | K | V | A | L | W | L | T | F | N | E | I | N | M | S | L | H | A | P |
Query Conservation |   |
. | . | . | . | . | . | . |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
| . |   |
|
|   |
|   |
|
|
|
|
|
|   |
|   |   |
|   |
Template Sequence |   |
R | G | S | D | M | K | I | W | V | N | S | S | D | G | V | T | P | L | I | G | E | V | W | P | G | Q | T | V | F | P | D | Y | T | N | P | N | C | A | V | W | W | T | K | E | F | E | L | F | H | N | Q | V | E | . |
F | D | G | I | W | I | D | M | N | E | V | S | N | F | V | D | G | S |
Template Known Secondary structure |   |
 |  |  |  |  | T |
| B |
| B |
| T | T | S | S | S | B |
|
|  |  |  | T | T |  |  |  |  |
| B |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| . |
| S |  |  |  |  |
| S | T | T | T |
|
| S | S | S | B | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | |
. | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|