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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank22Aligned Residues442
% Identity30%Templatec2jf7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:strictosidine-o-beta-d-glucosidase; PDBTitle: structure of strictosidine glucosidase
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KAFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLR
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Template Sequence  RDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQ. . . . . RSPAKISDGSNGNQAINCYHMYKEDIKIMKQTGLESYR
Template Known Secondary structure  GGS
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TTSTT


B.....
GGGSTTS

SSSTT
T
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   41........50.........60.........70....... ..80.........90.........100.........110.....
 
   82.......90.... .....100.........110.........120.........130.........140.........150.........160
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Query Sequence  ISIAWARIFPQGD. EVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRY
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Template Sequence  FSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEF
Template Known Secondary structure 

STTSSSTT


TT
SS

B
GGGSTT
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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   161........170.........180......... 190.........200.........210..... ....220.........
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Query Sequence  QHKVALWLTFNEINMSLHAPFTGVGLAEE. . . . . . . . SGEAEVYQAIHHQLVASARAVKACHS. . . LLPEAKIGNMLLGG
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Template Sequence  GDKIKYWTTFNEPHTFAVNGYALGEFAPGRGGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSM
Template Known Secondary structure  GGG
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STT

SSTT
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TTTT



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   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   230.........240....... ..250.........260.........270.........280.........290.........300........
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Query Sequence  LVYPLTCQPQDMLQAMEE. NRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHD
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Template Sequence  WMEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGR. . LPKFSADDSEKLKGCYDFIGMNYYTATYVTNA
Template Known Secondary structure  SSSSTTSS

GGG..S



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   276...280.........290.........300.........310.........320. ........330.........340.........350...
 
   309310... ......320.........330..... ....340.........350...... ...360.........370 .........380..
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Query Sequence  ESINK. . NAQGNILNMIPNPHLKSSEWGW. QIDPVGLRVLLNTLWDRYQKP. LFIVENGLGAKDSV. . EADGSIQDDYRI
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Template Sequence  VLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERT
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S
SBSSS
BSS
TTSS



S





TTS
T

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   354.....360.........370.........380.........390.........400.........410.........420.........430...
 
   383......390.........400.........410.........420.........430.........440.........450......
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Query Sequence  AYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIK
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Template Sequence  DYHQKHLASVRDAIDDGVNVKGYFVWSFFDNFEWNLG. YICRYGIIHVDYK. . . . . SFERYPKESAIWYKNFIA
Template Known Secondary structure  TT


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GGGT.TS

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   440.........450.........460.........470...... ...480......... 490.........500.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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