Job Description P11988 Confidence 97.81% Date Thu Jan 5 11:33:02 GMT 2012 Rank 139 Aligned Residues 281 % Identity 18% Template c2f61A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:acid beta-glucosidase; PDBTitle: crystal structure of partially deglycosylated acid beta-glucosidase Resolution 2.50 Å

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		75	.	.	.	.	80	.	.	.	.									.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure												.	.	.	.	.	.	.	.							.	.	.	.																															.
Query SS confidence												.	.	.	.	.	.	.	.							.	.	.	.																															.
Query Sequence		M	G	F	T	C	L	R	I	S	I	.	.	.	.	.	.	.	.	A	W	A	R	I	F	.	.	.	.	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	.	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A
Query Conservation												.	.	.	.	.	.	.	.							.	.	.	.																															.
Alig confidence												.	.	.	.	.	.	.	.							.	.	.	.																															.														.
Template Conservation																																																																										.
Template Sequence		I	G	Y	N	I	I	R	V	P	M	A	S	C	D	F	S	I	R	T	Y	T	Y	A	D	T	P	D	D	F	Q	L	H	N	F	S	L	P	E	E	D	T	K	L	K	I	P	L	I	H	R	A	L	Q	L	A	Q	R	P	V	S	L	L	A	S	P	W	T	S	P	T	W	L	.	K	T	N	G	A	V	N
Template Known Secondary structure		T										S			S	S	S	S	S				S			S	S	S		T	T		S	S									T	T													S	S									S				G	G	G	.	B	T	T		S	S	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.
		142														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.													.																																								.	.	.	.	.	.	.
Template Conservation																												.																																								.	.	.	.	.	.	.
Template Sequence		G	K	G	S	L	K	G	Q	P	G	D	I	Y	H	Q	T	W	A	R	Y	F	V	K	F	L	D	.	A	Y	A	E	H	K	L	Q	F	W	A	V	T	A	E	N	E	P	S	A	G	L	L	S	G	Y	P	F	Q	C	L	G	F	T	P	E	H	Q	R	.	.	.	.	.	.	.	D	F	I	A	R	D	L
Template Known Secondary structure		S	S			B	S	S		T	T	S																.					T	T				S				S		S	S	G	G	G	G	G	S	T	T			S												.	.	.	.	.	.	.						T
Template Predicted Secondary structure																												.																																								.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	T	L	A	N	S	T	H	H	N	V	R	L	L	M	L	D	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	L	L	P	H	W	A	K	V	V	L	T	D	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A
Template Known Secondary structure							T	S	T	T	T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T								T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.																																.	.	.	.	.	290	.	.	.	.	.	.	.	.													.	300	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	.	Q	K	P	L	F	I	V	E	N	G	L	G	A	K
Query Conservation																																																																			.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	Y	V	H	G	I	A	V	H	W	Y	L	D	F	L	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	T	L	G	E	T	H	R	L	F	P	N	T	M	L	F	A	S	E	A	C	V	G	S	K
Template Known Secondary structure			T	T										S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.																																				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.					.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	.	.	.	.	A	S	H	S	Q	M	S	K	R	Y	G	F	I	Y	V	D	R	D	D	N	G	E	G	S	L	T	R	T
Query Conservation																																																		.	.	.	.
Alig confidence																												.	.	.	.	.	.																	.	.	.	.					.				.	.									.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																									.				.	.									.	.	.	.	.
Template Sequence		F	W	E	Q	S	V	R	L	G	S	W	D	R	G	M	Q	Y	S	H	S	I	I	T	N	L	L	.	.	.	.	.	.	Y	H	V	V	G	W	T	D	W	N	L	A	L	N	P	E	G	G	P	N	W	V	R	N	.	F	V	D	.	.	S	P	I	I	V	D	I	T	.	.	.	.	.	K	D	T	F	Y
Template Known Secondary structure		T	T	S		S			T	T																		.	.	.	.	.	.	T	T									S		B		T	T	S				S	S			.				.	.		S					G	G	.	.	.	.	.	G	T
Template Predicted Secondary structure																												.	.	.	.	.	.																									.				.	.									.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.			400	.	.	.	.	.	.	.						.	.	410	.	.
		444	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	K	S	F	G	W	Y	A	E	V	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	P	M	F	Y	H	L	G	H	F	S	K
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions