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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank48Aligned Residues303
% Identity16%Templatec2depA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:thermostable celloxylanase; PDBTitle: crystal structure of xylanase b from clostridium2 stercorarium f9
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRI.
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Template Sequence  FRDYFPIGAAIEPGYTTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QIAELYKKHVNMLVAE
Template Known Secondary structure  TTTT


GGGSS..............................................
SS
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Query Sequence  . SIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPL. . VTLSHYEMPYGLVKNYGG. . . . . . . . . . . . . . WANRAV
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Template Sequence  NAMKPASLQPTEGNFQW. . . . . ADADRIVQFAKENGMELRFHTLVWHNQTPDWFFLD. KEGKPMVEETDPQKREENRKLL
Template Known Secondary structure  STTS
SBTTB


.....TT
SSS

GGGGB
.TTSSBGGG


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   85....90.........100. ........110.........120.........130...... ...140.........150........
 
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Query Sequence  IDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNM
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Template Sequence  LQRLENYIRAVVLRYKDDIKSWDVVNEVIEPNDPGGMRNSPWYQITGTE. . . . . . . . . . YIEVAFRATREAGGSDIKLYI
Template Known Secondary structure  TTT



B
TTSGGGB


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   159160.........170.........180.........190.........200....... ..210.........220........
 
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Query Sequence  LLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCV
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Template Sequence  NDYNTDDPV. . . . . . . . . . . . . . . . . . . . . . . . . KRDILYELVKNLLEKGVP. . . . . . . . . . . . . . IDGVGHQTHI. . . .
Template Known Secondary structure  S
TTS.........................TT

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Query Sequence  SHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQ. . . . . . DD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . DIYNPPVERIIESIKKF. AGLGLDNIITELDMSIYSWNDRSDYGDSIPDYILT
Template Known Secondary structure  ...........................SS
S
.TTT
SS
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Query Sequence  YRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKR. . . . YGFIYVDRDDNGEGSLTRTRKKSFGWYAE
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Template Sequence  LQAKRYQE. . . LFDALKENKDIVSAVVFWGISDKYSWLNG. FPVKRTNAPLLFDRNFM. . . . . . . . . . PKPAFWAIVD
Template Known Secondary structure  ...TTGGGS
SBTTS
GGGT.SSSSS



SSB
TTS
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   318.320..... ....330.........340.........350.... .....360.........370. ........380.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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