Job Description P11988 Confidence 79.19% Date Thu Jan 5 11:33:02 GMT 2012 Rank 239 Aligned Residues 106 % Identity 11% Template c2d0gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.
Predicted Secondary structure											.																																																															.
Query SS confidence											.																																																															.
Query Sequence		F	P	E	T	F	L	W	G	G	.	A	T	A	A	N	Q	V	E	G	A	W	Q	E	D	G	K	G	I	S	T	S	D	L	Q	P	H	G	V	M	G	K	M	E	P	R	I	L	G	K	E	N	I	K	D	V	A	I	D	F	Y	H	R	Y	P	E	D	I	A	L	F	A	E	.	M	G	F	T	C	L	R
Query Conservation											.																																																															.
Alig confidence											.																																										.	.	.	.	.	.	.	.														.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		F	P	D	R	F	Y	N	G	D	S	S	N	D	V	Q	T	G	S	Y	T	Y	N	G	T	P	T	E	K	K	A	W	G	S	S	V	Y	A	D	P	G	Y	D	N	S	L	V	F	F	G	G	D	.	.	.	.	.	.	.	.	L	A	G	I	D	Q	K	L	G	Y	I	K	K	T	L	G	A	N	I	L	Y
Template Known Secondary structure			G	G	G	T			S		G	G	G				T	T	S		B	S	S	S		B						T	T	S			S			T	T	S		G	G	G							.	.	.	.	.	.	.	.							T						T	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		82	.														.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Query Sequence		I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	.	.	.	.	I	K	P	L	V	T	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.																.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		L	N	P	I	F	K	A	P	T	N	H	K	Y	D	T	Q	D	Y	M	A	V	D	P	A	F	G	D	.	.	.	.	.	.	.	N	S	T	L	Q	T	L	I	N	D	I	H	S	T	A	N	G	P	K	G	Y	L	I	L	D	G
Template Known Secondary structure			S						S	S	S	S			S		S							T	T	T			.	.	.	.	.	.	.														S	S	S	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.								.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions