Job Description P11988 Confidence 89.23% Date Thu Jan 5 11:33:02 GMT 2012 Rank 202 Aligned Residues 203 % Identity 16% Template c2bvtB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-1,4-mannanase; PDBTitle: the structure of a modular endo-beta-1,4-mannanase from2 cellulomonas fimi explains the product specificity of3 glycoside hydrolase family 26 mannanases. Resolution 2.9 Å

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		121	.	.	.	.		.	.	.	.	130															.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.
Query SS confidence							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.
Query Sequence		L	V	T	L	S	.	H	Y	E	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	L	V	K	N	Y	G	G	W	A	N	R	A	V	.	.	.	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	V	A	.	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F
Query Conservation							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.
Alig confidence							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.									.	.	.																					.										.	.	.	.	.	.	.
Template Conservation																																.	.																																										.	.	.	.	.	.	.
Template Sequence		V	N	T	V	S	A	H	V	E	N	F	V	T	G	G	S	F	Y	D	T	S	G	D	T	L	R	A	V	L	P	.	.	G	G	S	H	H	A	E	L	V	A	Y	L	D	D	I	A	E	L	A	D	A	S	R	R	D	D	G	T	L	I	P	I	V	F	R	P	W	H	E	N	A	.	.	.	.	.	.	.
Template Known Secondary structure											B	T	T	T	T	B		T	T				T	T						S	T	.	.	T		T	T																			B		T	T			B								S			T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.																																										.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		T	G	V	G	L	A	E	E	S	G	.	.	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A
Query Conservation												.	.
Alig confidence		.										.	.										.	.	.	.	.	.														.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation		.																					.	.	.	.	.	.														.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		.	G	S	W	F	W	W	G	A	A	Y	G	S	P	G	E	Y	Q	E	L	Y	.	.	.	.	.	.	R	F	T	V	E	Y	L	R	D	V	K	G	V	.	.	.	.	.	.	S	N	F	L	Y	A	W	G	P	G	G	G	F	G	G	N	R	D	V	.	.	.	.	.	.	.	.	.	Y	L	R	T	Y	P
Template Known Secondary structure		.	S	S	S	S	T	T	S	G	G	G	S										.	.	.	.	.	.									T	T	T			.	.	.	.	.	.		S									S			T	T					.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure		.																					.	.	.	.	.	.														.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
			178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.										230	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	V	L	G	L	D	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	T	G	S	D	A	F	L
Template Known Secondary structure			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.																													240	.	.	.	.	.	.	.	.																															.	250	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		V	G	L	R	V	L	L	N	.	.	.	T	L	W	D	R	Y	Q	K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	A
Query Conservation										.	.	.
Alig confidence										.	.	.																															.	.	.	.	.	.					.																						.	.	.
Template Conservation																																											.	.	.	.	.	.					.																						.	.	.
Template Sequence		A	G	L	V	A	D	L	R	M	I	A	E	I	A	D	E	K	G	K	V	S	A	F	T	E	F	G	V	S	G	G	V	G	T	N	G	S	S	P	A	Q	.	.	.	.	.	.	W	F	T	K	.	V	L	A	A	I	K	A	D	P	V	A	S	R	N	A	Y	M	E	T	W	A	.	.	.	N	F	D	A
Template Known Secondary structure																			T					B						T	T		S	S	T	T	S				T	T	.	.	.	.	.	.					.								S	T	T	T	T			S							.	.	.	B		S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.					.																						.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.
		417	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	S	Q	M	S	K
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		G	Q	H	.	F	V	P
Template Known Secondary structure		S	S	B	.	S	S
Template Predicted Secondary structure					.
Template SS confidence
		328	.	330		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions