Job Description P11988 Confidence 99.87% Date Thu Jan 5 11:33:02 GMT 2012 Rank 71 Aligned Residues 288 % Identity 18% Template c2bs9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-xylosidase; PDBTitle: native crystal structure of a gh39 beta-xylosidase xynb12 from geobacillus stearothermophilus Resolution 2.2 Å

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		65	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure										.											.	.	.	.	.	.	.	.
Query SS confidence										.											.	.	.	.	.	.	.	.
Query Sequence		Y	P	E	D	I	A	L	F	.	A	E	M	G	F	T	C	L	R	I	.	.	.	.	.	.	.	.	S	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K
Query Conservation										.											.	.	.	.	.	.	.	.
Alig confidence										.											.	.	.	.	.	.	.	.																		.	.	.																										.	.
Template Conservation																																														.	.	.																										.	.
Template Sequence		Y	L	D	H	L	K	L	V	Q	E	K	I	G	F	R	Y	I	R	G	H	G	L	L	S	D	D	V	G	I	Y	R	E	V	E	I	D	G	E	M	K	P	F	Y	N	.	.	.	F	T	Y	I	D	R	I	V	D	S	Y	L	A	L	N	I	R	P	F	I	E	F	G	F	M	.	.	P	K	A	L	A	S
Template Known Secondary structure													S			S					S		T	T	S	T	T	T									T	T								.	.	.														T	T										B	.	.		G	G	G	B	S
Template Predicted Secondary structure																																														.	.	.																										.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.
										136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	N	Y	G	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	.	.	.	.	.	.	.	K	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H
Query Conservation		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.		.																										.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	Q	T	V	F	Y	W	K	.	G	N	V	T	P	P	K	D	Y	N	K	W	R	D	L	I	V	A	V	V	S	H	F	I	E	R	Y	G	I	E	E	V	R	T	W	L	F	E	V	W	N	E	P	N	L	V	N	F	W	K	D	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q
Template Known Secondary structure		S					T	T	T	T	.				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		E	Y	F	K	L	Y	E	V	T	A	R	A	V	K	S	V	D	P	H	L	Q	V	G	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	C	G	G	S	D	E	W	I	T	D	F	L	H	F	.	.	.	.	.	.	.
Template Known Secondary structure																			T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S		T										.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																																	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.							.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence		T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	.	.	.	.	.	.	Q
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	C	A	E	R	R	V	P	V	D	F	V	S	R	H	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	K	A	P	H	K	K	T	F	E	Y	Y	Y	Q	E	L	E	P	P	E	D	M	L	E	Q	F	K	T	V	R	A	L	I	R	Q	S	P	F	P	H
Template Known Secondary structure		.	.	.	.				T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		S		S				S	S						B																				S	S		T	T
Template Predicted Secondary structure		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	A	S	H	S	Q	M	S	K	R	.	.	.	.	.	Y	G	F	I	Y
Query Conservation																																																																								.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																										.	.															.		.					.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.																										.	.															.		.
Template Sequence		L	P	L	H	I	T	E	Y	N	T	S	Y	S	P	I	.	.	.	.	.	.	.	N	P	V	H	D	T	A	L	N	A	A	Y	I	A	R	I	L	S	E	G	G	D	Y	V	D	.	.	S	F	S	Y	W	T	F	S	D	V	F	E	E	M	.	D	.	V	P	K	A	L	F	H	G	G	F	G	L	V	A
Template Known Secondary structure											S		S		T	T	.	.	.	.	.	.	.		G	G	G	G	S														G	G	G	T		S	.	.					S		S	B	S				T	T	.	S	.	S		S	S	S	S	S			S		S
Template Predicted Secondary structure																	.	.	.	.	.	.	.																										.	.															.		.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.		.		.	.	.	330	.	.	.	.	.	.	.	.	.	340
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	D	D	N	G	E	G	S	L	T	R	T	R	K	K	S	F	G	W	Y	A	E	V	I	K
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	S	I	.	.	.	.	.	.	.	.	.	.	P	K	P	T	F	H	A	F	T	F	F	N	A
Template Known Secondary structure		T	T	T		.	.	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.											.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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