Return to main results Retrieve Phyre Job Id

Job DescriptionP11988
Confidence85.02%DateThu Jan 5 11:33:02 GMT 2012
Rank224Aligned Residues82
% Identity20%Templatec1zjaB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:trehalulose synthase; PDBTitle: crystal structure of the trehalulose synthase mutb from2 pseudomonas mesoacidophila mx-45 (triclinic form)
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80... ......90.........
Predicted Secondary structure 






























..............












Query SS confidence 

















































. . . . . . . . . . . . . .















Query Sequence  DLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRIS. . . . . . . . . . . . . . IAWARIFPQGDEVEPN
Query Conservation 
                       
 
 
 

 


 

  

   



..............





 
 
     
Alig confidence 





















..

























..............











....
Template Conservation   
    


 
    
 
    ..  

  

   
 


 


  
 
 

        

   
   

   

....
Template Sequence  PWWKSAVFYQVYPRSFKDTNGD. . GIGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGT. . . .
Template Known Secondary structure 



GGGT

SSSS..SS

TT







TTTTSS
S
GGG

....
Template Predicted Secondary structure 












..


































....
Template SS confidence 















































































   5....10.........20...... ...30.........40.........50.........60.........70........
 
   100.........110.........120....
Predicted Secondary structure 



Query SS confidence 
























Query Sequence  EAGLAFYDRLFDEMAQAGIKPLVTL
Query Conservation    

  
  


 
   

 




Alig confidence  ...





















Template Conservation  ...  


 

   
  

 

 
 
Template Sequence  . . . MEDFDRLMAELKKRGMRLMVDV
Template Known Secondary structure  ...TT
Template Predicted Secondary structure  ...


Template SS confidence 
























   7980.........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions