Job Description P11988 Confidence 84.51% Date Thu Jan 5 11:33:02 GMT 2012 Rank 227 Aligned Residues 85 % Identity 28% Template c1wzaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase a; PDBTitle: crystal structure of alpha-amylase from h.orenii Resolution 1.60 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.														.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query Sequence		I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	.	.	.	.	S	H	Y	E	M	P	Y
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		P	E	T	I	A	D	L	G	V	N	G	I	W	L	M	P	I	F	K	S	P	S	Y	H	G	Y	D	V	T	D	Y	Y	K	I	N	P	D	Y	G	T	.	.	.	.	.	.	.	L	E	D	F	H	K	L	V	E	A	A	H	Q	R	G	I	K	V	I	I	D	L	P	I	N	H	T	S	E	R	H	P	W
Template Known Secondary structure		T	T			S	S				S											S	S	S	S			S		S							G	G	G			.	.	.	.	.	.	.														T	T										S	B			T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		132	.	.	.	.	.	.																																																	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	V	K	N	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																												.
Template Sequence		F	L	K	A	S	R	D	K	N	S	E	Y	R	D	Y	Y	V	W	A	G	P	D	T	D	T	K	E	T	K	L	D	G	G	R	V	W	H	Y	S	P	T	G	M	Y	Y	G	Y	F	W	S	G	M	P	D	L	N	Y	N	N	P	E	V	Q	E	K	V	I	G	I	A	K	Y	W	L	.	K	Q	G
Template Known Secondary structure							T		T	T		T	T	G	G	G	B		B			S						B		S	S	S		B		S					T	T						S	S		T	T	S		B	B		T	T	S																.		T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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