Job Description P11988 Confidence 99.29% Date Thu Jan 5 11:33:02 GMT 2012 Rank 107 Aligned Residues 260 % Identity 18% Template c1wkyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of alkaline mannanase from bacillus sp. strain jamb-2 602: catalytic domain and its carbohydrate binding module Resolution 1.65 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	A	A	N	Q	V	E	G	A	W	Q	E	D	G	K	G	I	S	T	S	D	L	Q	P	H	G	V	M	G	K	M	E	P	R	I	L	G	K	E	N	I	K	D	V	A	I	D	F	Y	H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		A	N	S	G	F	Y	V	S	G	T	T	L	Y	D	A	N	G	N	P	F	V	M	R	G	I	N	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	W	Y	K	D	Q	A	T	T	A	I	E	G	I	A	N	T	G	A	N	T	V	R	I	V	L	S	D	.	.	.	.	.	.
Template Known Secondary structure										T	T					T	T	S		B										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		G	G	G										T	T	T		S									.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	.	.	V	A	L	W	L	T	F
Query Conservation																																																																									.	.
Alig confidence		.	.																																	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	G	Q	W	T	K	D	D	I	Q	T	V	R	N	L	I	S	L	A	E	D	N	N	L	V	A	V	L	E	V	H	D	.	.	.	.	.	.	.	.	.	.	A	T	G	Y	D	S	I	A	S	L	N	R	A	V	D	Y	W	I	E	M	R	S	A	L	I	G	K	E	D	T	V	I	I	N	I	A
Template Known Secondary structure		.	.	S	S	S	S																		T	T									T	.	.	.	.	.	.	.	.	.	.	T	T	T																	T	G	G	G	T	T	T		T	T	T
Template Predicted Secondary structure		.	.																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	W	F	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	W	D	G	A	A	.	.	.	.	.	.	.	W	A	D	G	Y	K	Q	A	I	P	R	L	R	N	A	G	L	N	N	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.		S	S					.	.	.	.	.	.	.															T	T			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160														.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S
Query Conservation
Alig confidence		.	.	.																					.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																					.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	M	I	D	A	A	G	W	G	Q	F	P	Q	S	I	H	D	Y	G	R	E	.	.	.	.	.	.	.	.	.	.	V	F	N	A	D	P	Q	R	N	T	M	F	S	I	H	M	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.					B	T	T	T	T	B	T										.	.	.	.	.	.	.	.	.	.				T		T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																					.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	Q	K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P
Query Conservation
Alig confidence		.	.																		.																.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																		.																.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	Y	A	G	G	N	A	S	Q	V	R	T	N	I	D	R	V	.	L	N	Q	D	L	A	L	V	I	G	E	F	G	H	R	.	.	.	.	.	H	T	N	G	D	V	D	E	S	T	I	M	S	Y	S	E	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	G	W	L	A	W	S	W
Template Known Secondary structure		.	.	T	T	T	S	S	S												.		T	T	T										S		.	.	.	.	.		T	T															T	.	.	.	.	.	.	.	.	.	.	.	.	.	T						S		S
Template Predicted Secondary structure		.	.																		.																.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.														.	.	.	.	280	.	.	.	.
		411	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	L	V	S	A	S	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	N	G	P	E	W	E	Y
Template Known Secondary structure		S				G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions