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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank20Aligned Residues441
% Identity33%Templatec1v02F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:dhurrinase; PDBTitle: crystal structure of the sorghum bicolor dhurrinase 1
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  AFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRI
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Template Sequence  WFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCH. . . . . NFPEWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRF
Template Known Secondary structure  GS
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TTSTT


B.....
GGGSTTS

SSSTT
TT
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   24.....30.........40.........50......... 60.........70.........80.........90........
 
   83......90.... .....100.........110.........120.........130.........140.........150.........160.
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Query Sequence  SIAWARIFPQGD. EVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQ
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Template Sequence  SISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFG
Template Known Secondary structure 

STTSSSTT


TT
SS

B
GGGSTT
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   162.......170.........180......... 190.........200.........210........ .220......
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Query Sequence  HKVALWLTFNEINMSLHAPFTGVGLAEE. . . . . . . . . . . . . SGEAEVYQAIHHQLVASARAVKACHSLLP. . EAKIGNML
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Template Sequence  KTVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLAL
Template Known Secondary structure  TT


TS

STT
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TTS
SSB
SS
TTTT
TTT
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   227..230.........240....... ..250.........260.........270.........280.........290.........300.....
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Query Sequence  LGGLVYPLTCQPQDMLQAMEE. NRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCV
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Template Sequence  NVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDR. . VPYFKEKEQEKLVGSYDMIGINYYTSTFS
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SSSSTSS

GGG..S



TT

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   259260.........270.........280.........290.........300....... ..310.........320.........330......
 
   306...310......... 320.........330..... ....340.........350... ......360......... 370.
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Query Sequence  SHDESINKNAQGNI. . . . . . . . . . LNMIPNPHLKSSEWGW. QIDPVGLRVLLNTLWDRY. QKPLFIVENGLGAKDS. . VE
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Template Sequence  KHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLP
Template Known Secondary structure 


STT



SGGGGG
SB
TTS
BSS
B
SSSS
B

TTS







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   337..340.........350.........360.........370.........380.........390.........400.........410......
 
   372.......380.........390.........400.........410.........420.........430.........440.........450.
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Query Sequence  ADGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWY
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Template Sequence  KPVALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSG. YTERFGIVYVDRENG. . . . CERTMKRSARWL
Template Known Secondary structure 

TT


SB



GGGG.GG

SGGGT....T
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   417..420.........430.........440.........450.........460.... .....470......... 480.........490.
 
   452...
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Query Sequence  AEVI
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Template Sequence  QEFN
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   492...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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