Job Description P11988 Confidence 99.62% Date Thu Jan 5 11:33:02 GMT 2012 Rank 93 Aligned Residues 254 % Identity 17% Template c1iszA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-d-xylanase; PDBTitle: crystal structure of xylanase from streptomyces2 olivaceoviridis e-86 complexed with galactose Resolution 2.00 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	.	.	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K
Query Conservation																																					.	.
Alig confidence																		.	.	.	.	.															.	.																.	.	.	.
Template Conservation																		.	.	.	.	.																																.	.	.	.
Template Sequence		I	D	A	T	E	P	Q	R	G	Q	F	N	F	S	A	G	.	.	.	.	.	D	R	V	Y	N	W	A	V	Q	N	G	K	Q	V	R	G	H	T	L	A	W	H	S	Q	Q	P	G	W	M	Q	S	.	.	.	.	L	S	G	S	T	L	R	Q	A	M	I	D	H	I	N	G	V	M	G	H	Y	K	G	K
Template Known Secondary structure							S	B	T	T	B							.	.	.	.	.										T	T											S	S	S								.	.	.	.																					T	T	T	T
Template Predicted Secondary structure																		.	.	.	.	.																																.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Sequence		I	A	Q	W	D	V	V	N	E	A	F	S	D	D	G	S	G	G	R	R	D	S	N	L	Q	R	T	G	N	.	.	.	.	.	.	.	.	.	.	.	D	W	I	E	V	A	F	R	T	A	R	A	A	D	P	A	A	K	L	C	Y	N	D	Y	N	I	.	.	.	.	E	N	W	T	W	A	K	T	Q	G
Template Known Secondary structure			S									B		S	S	S	S			B			S	T	T	G	G	G		T	.	.	.	.	.	.	.	.	.	.	.	T														T	T	S							S	S		.	.	.	.		S	T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.												.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	R	D	F	K	Q	R	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	C	V	G	F	Q	S	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.																					.	.	190	.	.	.	.	.	.	.	.															.	200	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	Q	K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	S	G	S	P	Y	N	S	N	F	R	T	T	L	Q	N	F	.	A	A	L	G	V	D	V	A	I	T	E	L	D	I	Q	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	Y	A	A	V	T	N	D	C	L	A	V	S	R	C	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	B	T	T	B				T	T									.		T	T	T											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.																		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	T	S	W	G	P	I	D	L	V	S	A	S	H	S	Q	M	S	K	R	Y	G	F	I	Y	V	D	R	D	D	N	G	E	G	S	L	T	R	T	R	K	K	S	F	G	W	Y	A	E	V	I	K	T	R	G
Query Conservation
Alig confidence																		.				.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation																		.				.	.									.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	T	V	W	G	V	R	D	T	D	S	W	R	S	G	.	D	T	P	.	.	L	L	F	N	G	D	G	S	.	.	.	.	.	.	.	.	.	.	K	K	A	A	Y	T	A	V	L	N	A	L	N	G	G	G
Template Known Secondary structure						S		S	B	G	G	G	S	T	T	G	G	.	G			.	.	S	S	B		T	T	S		.	.	.	.	.	.	.	.	.	.	B												T
Template Predicted Secondary structure																		.				.	.									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280			.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions