Job Description P32688 Confidence 100.00% Date Thu Jan 5 11:50:12 GMT 2012 Rank 1 Aligned Residues 225 % Identity 43% Template c3p42D_ PDB info PDB header:unknown function Chain: D: PDB Molecule:predicted protein; PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon Resolution 1.91 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	G	T	V	K	V	F	S	N	G	S	S	E	A	K	T	L	T	G	A	E	H	L	I	D	L	V	G	Q	P	R	.	L	A	N	S	W	W	P	G	A	V	I	S	E	E	L	A	T	A	A	A	L	R	Q	Q	Q	A	L	L	T	R	L	A	E	Q	G	A	D	S	S	A	D	D	A	A	A	I	N	A
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		Q	G	X	V	T	I	Y	L	P	G	E	Q	Q	T	L	S	V	G	P	V	E	N	V	A	Q	L	V	T	Q	P	Q	L	R	D	R	L	W	W	P	G	A	L	L	T	D	S	A	A	K	A	K	A	L	K	D	Y	Q	H	V	X	A	Q	L	A	S	W	E	A	E	A	D	D	D	V	A	A	T	I	K	S
Template Known Secondary structure										T	T		S									S	B								T	T	T	T	T	T	S		G	G	G																														S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	Q	I	Q	A	L	K	V	T	G	R	Q	K	I	N	L	D	P	D	I	V	R	V	A	E	R	G	N	P	P	L	Q	G	N	Y	T	L	W	V	G	P	P	P	S	T	V	T	L	F	G	L	I	S	R	P	G	K	Q	P	F	T	P	G	R	D	V	A	S	Y	L	S	D	Q	S	L	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	Q	Q	L	L	N	L	N	I	T	G	R	L	P	V	K	L	D	P	D	F	V	R	V	D	E	N	S	N	P	P	L	V	G	D	Y	T	L	Y	T	V	Q	R	P	V	T	I	T	L	L	G	A	V	S	G	A	G	Q	L	P	W	L	A	G	R	S	V	T	D	Y	L	Q	D	H	P	R	L	A	G
Template Known Secondary structure						T	T	T								S					T	T					S	T	T	S	S		B			S											S							S	B	T	T								T	T								T	T			B		T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	R	S	Y	A	W	V	V	Y	P	D	G	R	T	Q	K	A	P	V	A	Y	W	N	K	R	H	V	E	P	M	P	G	S	I	I	Y	V	G	L	A	D	S	V	W	S	E	T	P	D	A	L	N	A	D	I	L	Q	T	L	T	Q	R	I	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	K	N	N	V	X	V	I	T	P	E	G	E	T	V	V	A	P	V	A	L	W	N	K	R	H	V	E	P	P	P	G	S	Q	L	W	L	G	F	S	A	H	V	L	P	E	K	Y	A	D	L	N	D	Q	I	V	S	V	L	T	Q	R	V	P	E
Template Known Secondary structure		B		S	S							T	T	S								S		S	S								T	T							B		T	T	T	S		G	G	G	T	T											T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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