Return to main results Retrieve Phyre Job Id

Job DescriptionP32688
Confidence26.39%DateThu Jan 5 11:50:12 GMT 2012
Rank20Aligned Residues33
% Identity30%Templatec1mhsA_
PDB info PDB header:membrane protein, proton transportChain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.......
Predicted Secondary structure 




























Query SS confidence 








































Query Sequence  LSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYV
Query Conservation     

   
 

 


 
     
 

       

  
 
Alig confidence 












.









.......









Template Conservation 
         
 
.

    
   ....... 

 



 
Template Sequence  LKKTLALKAVVLR. DGTLKEIEAP. . . . . . . EVVPGDILQV
Template Known Secondary structure  TTT


SS

.SSS

TT.......TS
TTS
Template Predicted Secondary structure 


.

.......




Template SS confidence 








































   172.......180.... .....190.... .....200....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions