Job Description P0A993 Confidence 5.82% Date Thu Jan 5 11:09:40 GMT 2012 Rank 65 Aligned Residues 47 % Identity 15% Template c3jxoB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 1.55 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	L	D	G	S	S	N	I	D	V	N	V	S	V	G	T	I	F	S	I	Y	R	R	V	T	P	V	G	T	P	V	T	E	E	D	F	L	Q	P	G	N	K	Q	V	A	A	G
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		S	P	V	V	G	K	K	L	K	D	L	P	L	P	R	D	S	I	I	A	A	I	V	R	G	G	V	L	V	V	.	P	R	G	D	T	E	I	L	S	G	D	K	L	Y	V	I	V
Template Known Secondary structure			T	T	T	T		B	G	G	G					T	T									T	T					.			T	T		B			T	T
Template Predicted Secondary structure																																.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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