 |
Job Description | P0A993 | Confidence | 7.37% | Date | Thu Jan 5 11:09:40 GMT 2012 |
Rank | 52 | Aligned Residues | 75 |
% Identity | 15% | Template | c1m2wA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:mannitol dehydrogenase; |
PDBTitle: pseudomonas fluorescens mannitol 2-dehydrogenase ternary complex with2 nad and d-mannitol
|
Resolution | 1.80 Å |
|
 |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | E | H | A | K | Y | V | V | L | M | D | P | L | D | G | S | S | N | I | D | V | N | V | S | V | G | T | I | F | S | I | Y | R | R | V | T | P | V | G | T | P | V | T | E | E | D | F | L | Q | P | G | N | K | Q | V | A | A | G | Y | V | V | Y | G | S | S | T | M | L | V | Y | T | T | G | C | G | V | H | A | F | T |
Query Conservation |   |
  |   |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
| . | . | . |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |
|
|
|   |
|
|
|
|   | . |
|
|   |
Template Sequence |   |
G | Q | D | Y | L | F | T | L | Y | E | L | G | D | T | D | D | T | E | V | R | V | . |
. |
. |
I | G | S | I | S | D | X | L | L | A | E | D | S | A | Q | A | L | I | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | A | S | P | E | I | R | I | V | S | L | T | I | T | E | G | . |
G | Y | C |
Template Known Secondary structure |   |
T | T | T | T |
|  |  |  |  |  |
|
| S | S | S |
|
|
|  |  |  | . | . | . |  |
|
|  |  |  |  |  |  | G | G | G |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T |
| T | T |
|
|  |  |  |  |
|
|
| T | T | . | T | T |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
. | . | . |
  |
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | P | S | L | G | V | F | C | L | C | Q | E | R | M |
Query Conservation |   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
I | D | D | S | N | G | E | F | X | A | H | L | P | Q | I |
Template Known Secondary structure |   |
B |
| T | T | T |
|
| B |
| T | T | S |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|