|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | E | R | F | E | Q | R | I | A | Q | E | T | A | I | E | P | Q | D | W | M | P | D | A | Y | R | K | T | L | I | R | Q | I | G | Q | H | A | H | S | E | I | V | G | M | L | P | E | G | N | W | I | T | R | A | P | T | L | R | R | K | A | I | L | L | A | K | V | Q | D | E | A | G | H | G | L | Y | L | Y | S | A |
Query Conservation |   |
  |
|   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|
|
|   |   |
|   |
|
|
|   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|
|   |   |   |   |   |
Template Sequence |   |
Q | E | S | Y | V | Q | G | L | F | D | Q | L | N | D | R | G | H | D | Q | M | L | T | R | E | W | V | E | T | L | A | R | F | Y | T | P | A | R | Y | L | F | H | A | L | Q | M | G | S | V | Y | I | H | Q | I | A | P | A | S | T | I | T | N | C | A | T | Y | E | T | A | D | H | L | R | W | L | T | H | T | A | Y | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | |
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | T | L | G | C | A | R | E | D | I | Y | Q | K | M | L | D | G | R | M | K | Y | S | S | I | F | N | Y | P | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | S | W | . |
. |
. |
. |
. |
A | D | I | G | V | I | G | W | L | V | D | G | A | A | I | V | N | Q | V | A | L | C | . |
R | T | S | Y | G | P | Y | A | R |
Query Conservation |   |
|
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |
|   | . | . | . | . | . | . | . | . | . | . |   |
|
| . | . | . | . | . |
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|   | . |   |
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |
|   |
Template Sequence |   |
T | R | E | L | A | N | C | Y | P | D | V | G | F | G | K | R | E | R | D | V | W | E | N | D | P | A | W | Q | G | F | R | E | L | I | E | K | A | L | I | A | W | D | W | G | E | A | F | T | A | I | N | L | V | T | K | P | A | V | E | E | A | L | L | Q | Q | L | G | S | L | A | Q | S | E | G | D | T | L | L | G | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T | S |
| T | T | T | S |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | M | V | K | I | C | K | E | E | S | F | H | Q | R | Q | G | F | E | A | C | M | A | L | A | Q | G | S | E | A | Q | K | Q | M | L | Q | D | A | I | N | R | F | W | W | P | A | L | M |
Query Conservation |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |
| . |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
L | A | Q | A | Q | K | R | D | A | E | R | H | R | R | W | S | S | A | L | V | K | . |
M | A | L | E | K | E | G | N | R | E | V | L | Q | K | W | V | A | K | W | E | P | L | A | D | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | |
. | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
  |