Return to main results Retrieve Phyre Job Id

Job DescriptionP76077
Confidence98.40%DateThu Jan 5 12:18:16 GMT 2012
Rank11Aligned Residues207
% Identity10%Templatec1h0oA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ribonucleoside-diphosphate reductase; PDBTitle: cobalt substitution of mouse r2 ribonucleotide reductase to2 model the reactive diferrous state
Resolution2.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50. ........60.........70.........80.........90..
Predicted Secondary structure 



.








.......
Query SS confidence 






























.








































. . . . . . .
Query Sequence  DWMPDAYRKTLIRQIGQHAHSEIVGMLPEGN. WITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCARED. . . . . . .
Query Conservation 
  
 


  
 


   




  
    
.
   

 







 









 

  

 

 
 
 .......
Alig confidence 






























.








































.......
Template Conservation    
   

      

     
  
               
    
  
   
 

   

 

  
     
       
Template Sequence  EALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNA
Template Known Secondary structure  S
T





T
Template Predicted Secondary structure 







Template SS confidence 















































































   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   93......100.........110.........120.........130 ........ .140.........150.........160.....
Predicted Secondary structure  ..















....
.


Query SS confidence  . .





































. . . .







.


























Query Sequence  . . IYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAI. . . . VNQVALCR. TSYGPYARAMVKICKEESFHQRQGFEA
Query Conservation  ..

  
     
 
 


 
  





 
 

 
    ....  
 

  .


 


 

 





 


 

  
Alig confidence  ..





































....







.


























Template Conservation        
  
                        



 
 
 
     
   
 
 
    
  
 


  
  
   
Template Sequence  IETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLM
Template Known Secondary structure 

SSS
TT

Template Predicted Secondary structure 








Template SS confidence 















































































   198.200.........210.........220.........230.........240.........250.........260.........270.......
 
   166...170...... ...180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 


..




















Query SS confidence 










. .
































































Query Sequence  CMALAQGSEAQ. . KQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVP
Query Conservation 
 

  

 

..
 
 
 


  

  
 



 
  
   
     


  





   
    
 
  


 

Alig confidence 










..




















..............





























Template Conservation     
  
     
 

  


  
          ..............   

       

 
 

  
  

    
Template Sequence  FKHLVHKPAEQRVREIITNAVRIEQEFLTEALPV. . . . . . . . . . . . . . KLIGMNCTLMKQYIEFVADRLMLELGFNKI
Template Known Secondary structure  T
SS


TTS
G..............GGGT

TT


S
Template Predicted Secondary structure 




..............











Template SS confidence 













































































   278.280.........290.........300.........310. ........320.........330.........340.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions