Return to main results Retrieve Phyre Job Id

Job DescriptionP76108
Confidence100.00%DateThu Jan 5 12:19:01 GMT 2012
Rank57Aligned Residues262
% Identity15%Templated1xc1a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.51

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.... .....90... ......100.........110...
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Query Sequence  IIAWPGYIERGQTDKQYDWVTQFEKETGCAVNVKTAATSDEMVSLMT. . . KGGYDLVTA. SGDASLRLIMGKRVQPINTA
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Template Sequence  ITVYNG. . . . QHKEAAQAVADAFTRATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPAS
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   2..... ..10.........20.........30.........40.........50.........60.........70.......
 
   114.....120.........130.........140.........150.........160 .........170.........180.........190.
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Query Sequence  LIPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPP. . DSWQVVFVEQNLPDGKSNKGRVQAYDGPIYI
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Template Sequence  TINETRG. . . . . . . . KGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWK. . . . . . . NRIGYVPTSGAF
Template Known Secondary structure  T

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TTT

GGGS
SSGGGGSSGGGT.......TT
TT
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   78.80.... .....90.........100.........110.........120.........130 .........140..
 
   192.......200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  ADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTTVQMSDFKNEGVVASSAWPYQANALKAE. . . .
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Template Sequence  LEQIVAI. . . . . . . . . . . . . . VKLKGEAAALKWLKGLKEY. GKPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQ
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.S
SSTTSSS
GG
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   143...... 150.........160........ .170.........180.........190.........200.......
 
   268.270...... ...280.........290.........300.........310.........320.........330...
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Query Sequence  GQPVATVFP. . . KEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASP
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Template Sequence  NVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFN
Template Known Secondary structure  G




TT
GGG
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   208.210.........220.........230.........240.........250.........260.........270......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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