Job Description P76108 Confidence 21.75% Date Thu Jan 5 12:19:01 GMT 2012 Rank 125 Aligned Residues 170 % Identity 13% Template d1r9la_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.59

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	L	D	K	P	E	G	R	L	D	I	I	A	W	P	G	Y	I	E	R	G	Q	T	D	K	Q	Y	D	W	V	T	Q	F	E	K	E	T	G	C	A	V	N	V	K	T	A	A	T	S	D	E	M	V	S	L	M	T	K	G	G	Y	D	L	V	T	A	S	G	D	A	S	L	R	L	I	M	G	K	R
Query Conservation
Alig confidence																			.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	L	P	G	K	G	I	T	V	N	P	V	Q	S	T	I	.	.	.	.	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T	T									S		.	.	.	.	G	G	G														T	T																					T	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.
Predicted Secondary structure																																																						.																	.	.	.
Query SS confidence																																																						.																	.	.	.
Query Sequence		V	Q	P	I	N	T	A	L	I	P	N	W	K	T	L	D	P	R	V	V	K	G	D	W	F	N	V	G	G	K	V	Y	G	T	P	Y	Q	W	G	P	N	L	L	M	Y	N	T	K	T	F	P	T	.	P	P	D	S	W	Q	V	V	F	V	E	Q	N	L	P	D	.	.	.	G	K	S	N	K	G	R	V
Query Conservation																																																						.																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																													.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.						T	T	T							T	T	G	G	G	T					S		S																			T			B	G	G	G	G	G	S					G	G	G		S	S	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	Y	D	G	P	I	Y	I	A	D	A	A	L	F	V	K	A	T	Q	P	Q	L	G	I	S	D	P	Y	Q	L	T	E	E	Q	Y	Q	A	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G	N	Y	A	A	M	M	A	D	T	I
Template Known Secondary structure						T	T	S													T	T		T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions