Return to main results Retrieve Phyre Job Id

Job DescriptionP76108
Confidence100.00%DateThu Jan 5 12:19:01 GMT 2012
Rank19Aligned Residues343
% Identity13%Templated1elja_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   31........40.........50.........60.........70...... ...80....... ..90.........100........
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Query Sequence  KPEGRLDIIAWPGYIERGQTDKQYDWVTQFEKETGCAVNVKTAATS. DEMVSLMTKGG. YDLVTASGDASLRLIMGKRVQ
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Template Sequence  IEEGKVVIWHAM. . . QPNELEVFQSLAEEYMALPEVEIVFEQKPNLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLE
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TTTTTT
S
SGGGTT
B
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   3......10.... .....20.........30.........40.........50.........60.........70.........
 
   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  PINTALIPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKGRVQAYDGP
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Template Sequence  PIDEYVTEDLLNEFAPMAQDAM. QYKGHYYALPFAAETVAIIYNKEMVSEPPKTFDEMKAIMEKYYDPANEKYGIAWPIN
Template Known Secondary structure 

TTT

TTB
T.TT

TTT
SS

SS
BGGGTB
S
B


S
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   81........90.........100.. .......110.........120.........130.........140.........150.........
 
   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  IYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTTVQMSDFKNEGVVASSAWPYQANALKAEG
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Template Sequence  AYFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFTEIWPYMAPTGDYNTQQSIFLEGRAPMMVNGPWSINDVKKAG
Template Known Secondary structure  TTTS

STTTT
TTSTGGGS
S


TTSSS
GGGTT
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   269270..... ....280.........290.........300.........310.... .....320.........330.......
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Query Sequence  QPVATVF. . . . . . . . . . PKEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGD. VAAWFGSLPVVPEGCKASPLLGE
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Template Conservation          
                     
       
 
  

  
 
 
          
  
              
Template Sequence  INFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKNKDAAWKFAKWLTTSEESIKTLALELGYIPVLTKVLDDPEIKND
Template Known Secondary structure 





TT



BTT
S



B

BGGGGG
T
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   338.340.........350.........360.........370.........380.
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Query Sequence  KGCETNGFNYFDKIAFWKTPIAEGGKFVPYSRWTQDYIAIMGGR
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Template Sequence  PVIYG. . . . FGQAVQHAYLMPKSPKMSAVWGGVDGAINEILQDP
Template Known Secondary structure  ....T




TTTST
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   320.... .....330.........340.........350.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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