Job Description P76108 Confidence 69.62% Date Thu Jan 5 12:19:01 GMT 2012 Rank 95 Aligned Residues 55 % Identity 16% Template c3l6gA_ PDB info PDB header:glycine betaine-binding protein Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding PDBTitle: crystal structure of lactococcal opuac in its open conformation Resolution 1.90 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	R	L	D	I	I	A	W	P	G	Y	I	E	R	G	Q	T	D	K	Q	Y	D	W	V	T	Q	F	E	K	E	T	G	C	A	V	N	V	K	T	A	A	T	S	D	E	M	V	S	L	M	T	K	G	G	Y	D	L	V	T
Query Conservation
Alig confidence													.	.	.	.																											.
Template Conservation													.	.	.	.																											.
Template Sequence		D	K	K	V	D	L	V	Y	M	N	W	.	.	.	.	D	S	E	V	A	S	I	N	V	L	T	Q	A	M	K	E	H	G	F	D	V	K	T	T	A	L	.	D	N	A	V	A	W	Q	T	V	A	N	G	Q	A	D	G	M	V
Template Known Secondary structure											S		.	.	.	.																	T	T									.											T	T	S	S	S
Template Predicted Secondary structure													.	.	.	.																											.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions