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Job DescriptionP76108
Confidence99.95%DateThu Jan 5 12:19:01 GMT 2012
Rank66Aligned Residues276
% Identity10%Templatec3cfxA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:upf0100 protein ma_0280; PDBTitle: crystal structure of m. acetivorans periplasmic binding protein2 moda/wtpa with bound tungstate
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EGRLDIIAWPGYIERGQTDKQYDWVTQFEKET. GCAVNVKTAATSDEMVSLMTKGG. YDLVTA. SGDASLRLIMGKRVQP
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Template Sequence  GEVLTVFHAG. . . . . SLSVPFEELEAEFEAQHPGVDVQREAAGSAQSVRKITELGKKADVLASADYALIPSLMVPEYADW
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G.....GGSTT


TS



SSSTTTTTTT
S
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   40......... 50.........60.........70.........80.........90.........100.........110....
 
   110.........120.........130.........140.........150....... ..160.........170.........180..
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Query Sequence  INTALIPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFP. . . . . . . TPPDSWQVVFVEQNLPDGKSNKGRV
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Template Sequence  YAAFARNQM. . . . . . . . . . ILAYTNESKYGDEINTDNWYEILRRPDVRYGFSNPNDDPAGYRSQMVTQLAESYYNDDMIY
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TTSTTTTT

TTTSTT


TTT
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   115....120... ......130.........140.........150.........160.........170.........180....
 
   183......190.........200.........210.........220.........230........ .240.........250.........260
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Query Sequence  QAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHD. . TTVQMSDFKNEGVVASSAWPYQ
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Template Sequence  DDLMLANTGMTLTTEENGTALIHVPASEEISPNTSKIMLRSMEVELSSALETGEIDYLYIYRSVAEQHGFEYVALPPAID
Template Known Secondary structure  TGGGSS

TTS



GGG



TTTSSGGGGTTS
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TTTS
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   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   261........270........ .280.........290.........300.........310.........320....
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Query Sequence  ANALKAEGQPVATVFPKE. . . . . GVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPV
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Template Sequence  LSSLEYADNYSKVQVEMVNGEVVTGSPIVYGVTIPNNAENSELATEFVALLLGETGQQIFIEN. GQPPI
Template Known Secondary structure  S

GGGTT
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   265....270.........280.........290.........300.........310.........320....... ..330..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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