Job Description P76108 Confidence 100.00% Date Thu Jan 5 12:19:01 GMT 2012 Rank 61 Aligned Residues 293 % Identity 11% Template c2vozA_ PDB info PDB header:metal-binding protein Chain: A: PDB Molecule:periplasmic iron-binding protein; PDBTitle: apo futa2 from synechocystis pcc6803 Resolution 1.70 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		D	I	I	A	W	P	G	Y	I	E	R	G	Q	T	D	K	Q	Y	D	W	V	T	Q	F	E	K	E	T	G	C	A	V	N	V	K	T	A	A	T	S	D	E	M	V	S	L	M	T	K	G	G	Y	D	L	V	T	A	.	S	G	D	A	S	L	R	L	I	M	G	K	R	V	Q	P	I	N	T	A	L	I
Query Conservation																																																											.
Alig confidence									.	.	.	.																							.	.																							.
Template Conservation									.	.	.	.																							.	.
Template Sequence		T	I	N	L	Y	S	S	.	.	.	.	R	H	Y	N	T	D	D	A	L	Y	D	A	F	G	E	V	N	L	I	E	A	S	.	.	A	E	E	L	I	E	R	I	Q	S	E	G	A	N	S	P	G	D	I	L	F	T	V	D	A	G	M	L	W	R	A	E	Q	A	G	L	F	Q	P	V	R	S	G	K	L
Template Known Secondary structure								S	.	.	.	.				T	T									S									.	.											T	G	G	G				S						S										T	T		B
Template Predicted Secondary structure									.	.	.	.																							.	.
Template SS confidence
		35	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		P	N	W	K	T	L	D	P	R	V	V	K	G	D	W	F	N	V	G	G	K	V	Y	G	T	P	Y	Q	W	G	P	N	L	L	M	Y	N	T	K	T	F	P	T	.	P	P	D	S	W	Q	V	V	F	V	E	Q	N	L	P	D	G	K	S	N	K	G	R	V	Q	A	Y	D	G	P	I	Y	I	A	D	A
Query Conservation																																													.
Alig confidence					.	.	.	.	.	.	.	.	.																																.															.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template Sequence		N	E	R	.	.	.	.	.	.	.	.	.	I	P	E	N	L	R	H	P	D	G	L	W	Y	G	F	T	Q	R	A	R	V	L	Y	Y	S	R	D	R	V	N	P	A	D	L	S	T	Y	E	A	L	A	D	P	Q	W	R	.	.	.	.	.	.	.	G	K	I	L	V	R	P	S	S	N	V	Y	N	L	S
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	S		G	G	G	B		T	T	S	S															T	T	T			G	G	G				S	G	G	G	G	S	G	G	G	T	.	.	.	.	.	.	.	T	T						T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template SS confidence
		109	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																																						.	.	.	.
Query SS confidence																																								.																																						.	.	.	.
Query Sequence		A	L	F	V	K	A	T	Q	P	Q	L	G	I	S	D	P	Y	Q	L	T	E	E	Q	Y	Q	A	V	L	K	V	L	R	A	Q	H	S	L	I	.	H	R	Y	W	H	D	T	T	V	Q	M	S	D	F	K	N	E	G	V	V	A	S	S	A	W	P	Y	Q	A	N	A	L	K	A	E	G	Q	.	.	.	.
Query Conservation																																								.																																						.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																			.																																						.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	A	S	R	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	G	E	P	E	T	R	R	W	L	Q	G	L	V	G	N	F	A	R	Q	P	E	G	N	D	T	A	Q	I	R	A	I	A	A	G	I	G	D	V	A	I	A	N	S	Y	Y	Y	I	R	L	Q	K	S	T	D	P	A	D	Q
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																	T	B	S	S	S			S											T	T	S		S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.														180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
						270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure		.	.	.	.								.	.	.	.	.
Query SS confidence		.	.	.	.								.	.	.	.	.
Query Sequence		.	.	.	.	P	V	A	T	V	F	P	.	.	.	.	.	K	E	G	V	T	G	W	A	D	T	T	M	L	H	S	E	A	K	H	P	V	C	A	Y	K	W	M	N	W	S	L	T	P	K	V	Q	G	D	V	A	A	W	F	G	S	L	P	V	V	P	E	G	C	K	A	S	P	L	L	G	E	K	G	C
Query Conservation		.	.	.	.								.	.	.	.	.
Alig confidence		.	.	.	.								.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	V	E	K	V	S	L	F	F	P	N	T	G	S	G	E	R	G	T	H	V	N	V	S	G	A	G	V	L	K	N	A	P	N	R	D	A	A	I	A	F	L	E	Y	L	A	S	D	D	A	Q	R	Y	F	A	E	G	N	N	E	Y	P	V	I	P	G	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S		S	T	T	S			B										B	T	T		T	T												T	S											T	T				S	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	N	G	F	N	Y	F	D	K	I	A	F	W	K	T	P	I	A	E	G	G	K	F	V	P	Y	S	R	W	T	Q	D	Y	I	A	I
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	P	I	D	P	V	L	A	A	H	G	Q	L	K	G	D	P	L	N	V	S	N	L	G	R	Y	Q	P	D	S	A	R	L	M	N	E	V
Template Known Secondary structure		.								T	T					B			S		T						T											T
Template Predicted Secondary structure		.
Template SS confidence
			308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions