Job Description P0ADJ8 Confidence 3.89% Date Thu Jan 5 11:21:11 GMT 2012 Rank 38 Aligned Residues 100 % Identity 9% Template c2w8aC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																												.
Query SS confidence															.	.	.	.																																												.
Query Sequence		Y	Y	F	A	V	L	V	L	G	L	F	S	A	.	.	.	.	A	S	Y	Q	K	T	V	R	D	K	Y	E	G	I	P	T	T	S	I	Y	Y	M	T	C	L	T	V	F	I	I	S	V	A	L	L	M	V	G	L	W	N	A	T	.	L	L	L	S	E	K	G	F	Y	G	L	A	F	F	L	S	L	F	G
Query Conservation															.	.	.	.																																												.
Alig confidence															.	.	.	.														.	.	.																												.
Template Conservation																																.	.	.
Template Sequence		A	X	I	L	L	G	T	F	F	I	T	S	A	D	S	A	S	T	V	X	G	T	X	S	Q	H	G	Q	L	E	.	.	.	A	N	K	W	V	T	A	A	W	G	V	A	T	A	A	I	G	L	T	L	L	L	S	G	G	D	N	A	L	S	N	L	Q	N	V	T	I	V	A	A	T	P	F	L	F	V	V
Template Known Secondary structure																									T	T	T	T		S	S	.	.	.																									G	G	G
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.				.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	V	Q	K	N	I	R	D	A	G	I	N	P	P	K	E	T	Q	V	T	Q	E	E	Y	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	L	X	F	A	L	V	K	D	L	S	N	D	V	I	Y	L	E	Y	R	E	Q	Q	R	F	N	A
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions