Job Description P0ADJ8 Confidence 4.28% Date Thu Jan 5 11:21:11 GMT 2012 Rank 32 Aligned Residues 87 % Identity 10% Template c2vl0A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:elic pentameric ligand gated ion channel from PDBTitle: x-ray structure of a pentameric ligand gated ion channel2 from erwinia chrysanthemi (elic) Resolution 3.3 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	S	T	Y	S	P	A	F	S	I	V	S	W	I	A	L	V	G	G	I	V	T	Y	L	L	G	L	W	N	A	E	M	Q	L	N	E	K	G	Y	Y	F	A	V	L	V	L	G	L	F	S	A	A	S	Y	Q	K	T	V	R	D	K	Y	E	G	I	P	T	T	S	I	Y	Y	M	T	C	L	T	V	F
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		D	A	V	R	N	P	S	Y	Y	L	W	S	F	I	L	P	L	G	L	I	I	A	A	S	W	S	V	F	W	L	E	S	F	.	.	S	E	R	L	Q	T	S	F	T	L	M	L	T	V	V	A	Y	A	F	Y	T	S	N	I	L	P	R	L	P	Y	T	T	V	I	D	Q	M	I	I	A	G	Y	G	S	I
Template Known Secondary structure														T													T	T	S	S		S	S		.	.																									S				S	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		84	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	S	V	A	L	L	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	A	I	L	L	I	I	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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