Job Description P0ADJ8 Confidence 18.66% Date Thu Jan 5 11:21:11 GMT 2012 Rank 11 Aligned Residues 86 % Identity 16% Template c2ksrA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:neuronal acetylcholine receptor subunit beta-2; PDBTitle: nmr structures of tm domain of the n-acetylcholine receptor b2 subunit Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		S	T	Y	S	P	A	F	S	I	V	S	W	I	A	L	V	G	G	I	V	T	Y	L	L	G	L	W	N	A	E	M	Q	L	N	E	K	G	Y	Y	F	A	V	L	V	L	G	L	F	S	A	.	A	S	Y	Q	K	T	V	R	D	K	Y	E	G	I	P	T	T	S	I	Y	Y	M	T	C	L	T	V	F	I
Query Conservation																																																				.
Alig confidence																														.																						.
Template Conservation																														.
Template Sequence		R	R	K	P	L	F	Y	T	I	N	L	I	I	P	C	V	L	I	T	S	L	A	I	L	V	F	Y	L	.	P	S	D	C	G	E	K	M	T	L	C	I	S	V	L	L	A	L	T	V	F	L	L	L	I	S	K	I	V	P	P	T	S	L	D	V	P	L	V	G	K	Y	L	M	F	T	M	V	L	V	T
Template Known Secondary structure					T							T																T	S	.				S																							T	T			S	S		T	T
Template Predicted Secondary structure																														.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		85	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	A	L	L	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	I	V	T	S	V	C
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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