Job Description P0ADJ8 Confidence 30.70% Date Thu Jan 5 11:21:11 GMT 2012 Rank 7 Aligned Residues 123 % Identity 11% Template c2bg9C_ PDB info PDB header:ion channel/receptor Chain: C: PDB Molecule:acetylcholine receptor protein, delta chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution. Resolution 4.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		K	I	S	T	Y	S	P	A	F	S	I	V	S	W	I	A	L	V	G	G	I	V	T	Y	L	L	G	L	W	N	A	E	M	Q	L	N	E	K	G	Y	Y	F	A	V	L	V	L	G	L	F	S	A	.	A	S	Y	Q	K	T	V	R	D	K	Y	E	G	I	P	T	T	S	I	Y	Y	M	T	C	L	T	V
Query Conservation																																																						.
Alig confidence																																.																						.
Template Conservation																																.
Template Sequence		I	I	R	R	K	P	L	F	Y	V	I	N	F	I	T	P	C	V	L	I	S	F	L	A	A	L	A	F	Y	L	.	P	A	E	S	G	E	K	M	S	T	A	I	C	V	L	L	A	Q	A	V	F	L	L	L	T	S	Q	R	L	P	E	T	A	L	A	V	P	L	I	G	K	Y	L	M	F	I	M	S	L
Template Known Secondary structure								S	S																							.					T	T																													T	S
Template Predicted Secondary structure																																.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	I	S	V	A	L	L	M	V	G	L	W	N	A	T	L	L	L	S	E	K	G	F	Y	G	L	A	F	F	L	S	L	F	G	A	V	A	V	Q	K	N	I	R	D	A	G	I	N	P	P	K	E	T	Q	V	T	Q	E	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	G	V	V	V	N	C	G	I	V	L	N	F	H	F	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	T	H	S	G	I	D	S	T	N	Y	I	V	K	Q	I	K	E	K	N	A	Y	D	E	E	V
Template Known Secondary structure																			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.																.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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