Job Description P15042 Confidence 100.00% Date Thu Jan 5 11:34:23 GMT 2012 Rank 8 Aligned Residues 313 % Identity 48% Template d1v9pa3 SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain Adenylation domain of NAD+-dependent DNA ligase Resolution 2.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		E	S	I	E	Q	Q	L	T	E	L	R	T	T	L	R	H	H	E	Y	L	Y	H	V	M	D	A	P	E	I	P	D	A	E	Y	D	R	L	M	R	E	L	R	E	L	E	T	K	H	P	E	L	I	T	P	D	S	P	T	Q	R	V	G	A	A	P	.	L	A	A	F	S	Q	I	R	H	E	V	P	M	L
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		E	E	A	R	R	R	I	N	E	L	R	D	L	I	R	Y	H	N	Y	R	Y	Y	V	L	A	D	P	E	I	S	D	A	E	Y	D	R	L	L	R	E	L	K	E	L	E	E	R	F	P	E	F	K	S	P	D	S	P	T	E	Q	V	G	A	R	P	L	E	P	T	F	R	P	V	R	H	P	T	R	M	Y
Template Known Secondary structure																								T	T	S				S		S	S	T	T														S	G	G	G			T	T	S	S	G	G	G		S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	N	V	F	D	E	E	S	F	L	A	F	N	K	R	V	Q	D	R	L	K	N	N	E	K	V	T	W	C	C	E	L	K	L	D	G	L	A	V	S	I	L	Y	E	N	G	V	L	V	S	A	A	T	R	G	D	G	T	T	G	E	D	I	T	S	N	V	R	T	I	R	A	I	P	L	K	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	D	N	A	F	T	Y	E	E	V	L	A	F	E	E	R	L	E	R	A	L	G	R	K	R	P	F	L	Y	T	V	E	H	K	V	D	G	L	S	V	N	L	Y	Y	E	E	G	V	L	V	F	G	A	T	R	G	D	G	E	V	G	E	E	V	T	Q	N	L	L	T	I	P	T	I	P	R	R	L	K
Template Known Secondary structure								S	S	S	T	T	T								T	T		S	S		S												S									T	T									T	T	S	S				B		T	T	G	G	G	S	S	T	T	S		S	B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	N	I	P	A	R	L	E	V	R	G	E	V	F	L	P	Q	A	G	F	E	K	I	N	E	D	A	R	R	T	G	G	K	V	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	R	I	T	A	K	R	P	L	T	F	F	C	Y	G	V	G	V	L	E	G	G	E	L	P	D	T	H	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	V	P	D	R	L	E	V	R	G	E	V	Y	M	P	I	E	A	F	L	R	L	N	E	E	L	E	E	R	G	E	K	V	F	K	N	P	R	N	A	A	A	G	S	L	R	Q	K	D	P	R	V	T	A	K	R	G	L	R	A	T	F	Y	A	L	G	L	G	L	E	E	S	G	L	K	S	Q	Y
Template Known Secondary structure		.	.	S			S																										T					S	S	T	T								S		S	S					T	T	S										S	T	T					T			B
Template Predicted Secondary structure		.	.
Template SS confidence
				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	L	L	Q	F	K	K	W	G	L	P	V	S	D	R	V	T	L	C	E	S	A	E	E	V	L	A	F	Y	H	K	V	E	E	D	R	P	T	L	G	F	D	I	D	G	V	V	I	K	V	N	S	L	A	Q	Q	E	Q	L	G	F	V	A	R	A	P	R	W	A	V	A	F	K	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	L	L	W	L	K	E	K	G	F	P	V	E	H	G	Y	E	K	A	L	G	A	E	G	V	E	E	V	Y	R	R	F	L	A	Q	R	H	A	L	P	F	E	A	D	G	V	V	V	K	L	D	D	L	A	L	W	R	E	L	G	Y	T	A	R	A	P	R	F	A	L	A	Y	K	F	P
Template Known Secondary structure										T	T					S																				T	T	T	T	T	S	S	S										S	B	T						S		B		S	S		B	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions