Job Description P15042 Confidence 100.00% Date Thu Jan 5 11:34:23 GMT 2012 Rank 5 Aligned Residues 310 % Identity 47% Template d1ta8a_ SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain Adenylation domain of NAD+-dependent DNA ligase Resolution 1.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	S	I	E	Q	Q	L	T	E	L	R	T	T	L	R	H	H	E	Y	L	Y	H	V	M	D	A	P	E	I	P	D	A	E	Y	D	R	L	M	R	E	L	R	E	L	E	T	K	H	P	E	L	I	T	P	D	S	P	T	Q	R	V	G	A	A	P	L	A	A	F	S	Q	I	R	H	E	V	P	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A	A	T	T	R	A	Q	E	L	R	K	Q	L	N	Q	Y	S	H	E	Y	Y	V	K	D	Q	P	S	V	E	D	Y	V	Y	D	R	L	Y	K	E	L	V	D	I	E	T	E	F	P	D	L	I	T	P	D	S	P	T	Q	R	V	G	G	K	V	L	S	G	F	E	K	A	P	H	D	I	P	M	Y
Template Known Secondary structure																									T	S	S			S	S																				G	G	G			T	T		G	G	G	G	G				B		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	N	V	F	D	E	E	S	F	L	A	F	N	K	R	V	Q	D	R	L	K	N	N	E	K	V	T	W	C	C	E	L	K	L	D	G	L	A	V	S	I	L	Y	E	N	G	V	L	V	S	A	A	T	R	G	D	G	T	T	G	E	D	I	T	S	N	V	R	T	I	R	A	I	P	L	K	L	H
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		S	L	N	D	G	F	S	K	E	D	I	F	A	F	D	E	R	V	R	K	A	I	.	.	G	K	P	V	A	Y	C	C	E	L	K	I	D	G	L	A	I	S	L	R	Y	E	N	G	V	F	V	R	G	A	T	R	G	D	G	T	V	G	E	N	I	T	E	N	L	R	T	V	R	S	V	P	M	R	L	T
Template Known Secondary structure								S																.	.	S	S												S									T	T									T	T	S	S				B						T	T		T	T	S		S	B		S
Template Predicted Secondary structure																								.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	N	I	P	A	R	L	E	V	R	G	E	V	F	L	P	Q	A	G	F	E	K	I	N	E	D	A	R	R	T	G	G	K	V	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	R	I	T	A	K	R	P	L	T	F	F	C	Y	G	V	G	V	L	E	G	G	E	L	P	D	T	H	L
Query Conservation
Alig confidence		.	.	.																																																																									.
Template Conservation		.	.	.																																																																									.
Template Sequence		.	.	.	E	P	I	S	V	E	V	R	G	E	C	Y	M	P	K	Q	S	F	V	A	L	N	E	E	R	E	E	N	G	Q	D	I	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	T	K	I	V	A	K	R	N	L	N	T	F	L	Y	T	V	A	D	F	G	P	M	K	A	.	K	T	Q	F
Template Known Secondary structure		.	.	.	S																											T	T					S	S										T		S	B						T	S										S			T	T				.	S	B
Template Predicted Secondary structure		.	.	.																																																																									.
Template SS confidence
					166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	L	L	Q	F	K	K	W	G	L	P	V	S	D	R	V	T	L	C	E	S	A	E	E	V	L	A	F	Y	H	K	V	E	E	D	R	P	T	L	G	F	D	I	D	G	V	V	I	K	V	N	S	L	A	Q	Q	E	Q	L	G	F	V	A	R	A	P	R	W	A	V	A	F	K	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	E	E	L	S	A	I	G	F	R	T	N	P	E	R	Q	L	C	Q	S	I	D	E	V	W	A	Y	I	E	E	Y	H	E	K	R	S	T	L	P	Y	E	I	D	G	I	V	I	K	V	N	E	F	A	L	Q	D	E	L	G	F	T	V	K	A	P	R	W	A	I	A	Y	K	F	P
Template Known Secondary structure										T	T					T	T					S	S														T	G	G	G	S	S	S										S	B									B		S	S	S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions