Job Description P15042 Confidence 98.42% Date Thu Jan 5 11:34:23 GMT 2012 Rank 34 Aligned Residues 150 % Identity 16% Template d1fvia2 SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain ATP-dependent DNA ligase catalytic domain Resolution 2.00

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	C	C	E	L	K	L	D	G	L	A	V	S	I	L	Y	E	N	G	V	L	V	S	A	A	T	R	G	D	G	T	T	G	E	D	I	T	S	N	V	R	T	I	R	A	I	P	L	K	L	H	G	E	N	I	P	A	R	L	E	V	R	G	E	V	F	L	P	Q	A	G	F	E	K	I	N	E	D	A
Query Conservation
Alig confidence																	.	.	.					.	.	.					.	.	.	.							.	.	.	.	.	.																	.	.														.	.	.	.
Template Conservation																	.	.	.					.	.	.					.	.	.	.							.	.	.	.	.	.																	.	.														.	.	.	.
Template Sequence		P	C	L	A	T	P	K	I	A	G	I	R	S	V	K	.	.	.	Q	T	Q	M	.	.	.	L	S	R	T	.	.	.	.	F	K	P	I	R	N	.	.	.	.	.	.	S	V	M	N	R	L	L	T	E	L	L	P	E	G	S	D	.	.	G	E	I	S	I	E	G	A	T	F	Q	D	T	.	.	.	.
Template Known Secondary structure		S									S						.	.	.	S	S	S		.	.	.			T	T	.	.	.	.	S		B		S		.	.	.	.	.	.											S		T	T			.	.						T	T	S						.	.	.	.
Template Predicted Secondary structure																	.	.	.					.	.	.					.	.	.	.							.	.	.	.	.	.																	.	.														.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.				40	.	.	.					.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.										.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		R	R	T	G	G	K	V	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	R	I	T	A	K	R	P	L	T	F	F	C	Y	G	V	G	V	L	E	G	G	E	L	P	D	T	H	L	G	R	L	L	Q	F	K	K	W	G	L	P	V	S	D	R	.	.	.	.	.	.	.	.	.	V	T	L
Query Conservation																																																																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	A	V	M	T	G	H	A	.	.	.	.	.	.	K	F	S	Y	Y	W	F	D	Y	V	T	D	D	P	L	K	K	Y	I	D	R	V	E	D	M	K	N	Y	I	T	V	H	P	H	I	L	E	H	A	Q	V	K	I	I	P	L	I	P	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S				.	.	.	.	.	.											S	S		T	T	S																	G	G	G	G	G		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template SS confidence
																	79	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		C	E	S	A	E	E	V	L	A	F	Y	H	K	V	E	E	D	R	P	T	L	G	F	D	I	D	G	V	V	I	K	V	N	S	L	A	Q	Q	E	Q	L	G	.	F	V	A	R	A	P	R	W
Query Conservation																																												.
Alig confidence																					.	.	.	.	.	.															.	.		.
Template Conservation																					.	.	.	.	.	.															.	.
Template Sequence		I	N	N	I	T	E	L	L	Q	Y	E	R	D	V	L	S	K	G	F	.	.	.	.	.	.	E	G	V	M	I	R	K	P	D	G	K	Y	K	F	.	.	G	R	S	T	L	K	E	G	I	L
Template Known Secondary structure				S														T	T		.	.	.	.	.	.		S						T	T					S	.	.	S	B			T	T	T	T	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.															.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions