Job Description P15042 Confidence 100.00% Date Thu Jan 5 11:34:23 GMT 2012 Rank 7 Aligned Residues 308 % Identity 50% Template d1b04a_ SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain Adenylation domain of NAD+-dependent DNA ligase Resolution 2.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	I	E	Q	Q	L	T	E	L	R	T	T	L	R	H	H	E	Y	L	Y	H	V	M	D	A	P	E	I	P	D	A	E	Y	D	R	L	M	R	E	L	R	E	L	E	T	K	H	P	E	L	I	T	P	D	S	P	T	Q	R	V	G	A	A	P	L	A	A	F	S	Q	I	R	H	E	V	P	M	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	A	E	R	R	A	A	E	L	R	E	L	L	N	R	Y	G	Y	E	Y	Y	V	L	D	R	P	S	V	P	D	A	E	Y	D	R	L	M	Q	E	L	I	A	I	E	E	Q	Y	P	E	L	K	T	S	D	S	P	T	Q	R	I	G	G	P	P	L	E	A	F	R	K	V	A	H	R	V	P	M	M	S
Template Known Secondary structure																								T	T		S			S	S																			G	G	G			T	T		G	G	G	G	T						S								S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	N	V	F	D	E	E	S	F	L	A	F	N	K	R	V	Q	D	R	L	K	N	N	E	K	V	T	W	C	C	E	L	K	L	D	G	L	A	V	S	I	L	Y	E	N	G	V	L	V	S	A	A	T	R	G	D	G	T	T	G	E	D	I	T	S	N	V	R	T	I	R	A	I	P	L	K	L	H	G
Query Conservation
Alig confidence																							.	.	.																																																								.
Template Conservation																							.	.	.																																																								.
Template Sequence		L	A	N	A	F	G	E	G	D	L	R	D	F	D	R	R	V	R	Q	E	V	.	.	.	G	E	A	A	Y	V	C	E	L	A	I	D	G	L	A	V	S	V	R	Y	E	D	G	Y	F	V	Q	G	A	T	R	G	D	G	T	T	G	E	D	I	T	E	N	L	K	T	I	R	S	L	P	L	R	L	K	.
Template Known Secondary structure							S	T	T														.	.	.	S	S										S	S									T	T									T	T	S	S				B							T		T	T	S		S	B		S	.
Template Predicted Secondary structure																							.	.	.																																																								.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	I	P	A	R	L	E	V	R	G	E	V	F	L	P	Q	A	G	F	E	K	I	N	E	D	A	R	R	T	G	G	K	V	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	R	I	T	A	K	R	P	L	T	F	F	C	Y	G	V	G	V	L	E	G	G	E	L	P	D	T	H	L	G
Query Conservation
Alig confidence		.	.																											.	.																																													.
Template Conservation		.	.																											.	.																																													.
Template Sequence		.	.	E	P	V	S	L	E	A	R	G	E	A	F	M	P	K	A	S	F	L	R	L	N	E	E	R	K	.	.	A	R	E	L	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	K	V	A	A	S	R	Q	L	D	L	F	V	Y	G	L	A	D	A	E	A	L	G	I	.	A	S	H	S	E
Template Known Secondary structure		.	.	S																										.	.						S												S	S								T										T	T	T	T	T	T	T		.		B
Template Predicted Secondary structure		.	.																											.	.																																													.
Template SS confidence
				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	Q	F	K	K	W	G	L	P	V	S	D	R	V	T	L	C	E	S	A	E	E	V	L	A	F	Y	H	K	V	E	E	D	R	P	T	L	G	F	D	I	D	G	V	V	I	K	V	N	S	L	A	Q	Q	E	Q	L	G	F	V	A	R	A	P	R	W	A	V	A	F	K	F	P	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	D	Y	L	Q	A	L	G	F	K	V	N	P	E	R	R	R	C	A	N	I	D	E	V	I	A	F	V	S	E	W	H	D	K	R	P	Q	L	P	Y	E	I	D	G	I	V	I	K	V	D	S	F	A	Q	Q	R	A	L	G	A	T	A	K	S	P	R	W	A	I	A	Y	K	F	P	A	E
Template Known Secondary structure									T	T					T	T					S	S															S	T	T		S	S											B											S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions