Job Description P15042 Confidence 98.53% Date Thu Jan 5 11:34:23 GMT 2012 Rank 31 Aligned Residues 176 % Identity 18% Template c3qwuA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: putative atp-dependent dna ligase from aquifex aeolicus. Resolution 2.35 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	R	V	G	A	A	P	L	A	A	F	S	Q	I	R	H	E	V	P	M	L	S	L	D	N	V	F	D	E	E	S	F	L	A	F	N	K	R	V	Q	D	R	L	K	N	N	E	K	V	T	W	C	C	E	L	K	L	D	G	L	A	V	S	I	L	Y	E	N	G	V	L	V	S	A	A	T	R	G	D
Query Conservation
Alig confidence																	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.							.
Template Conservation																	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.							.
Template Sequence		T	A	I	F	K	D	F	I	I	W	G	Y	P	H	I	.	.	.	G	R	I	F	L	L	E	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	Q	F	E	A	P	F	W	V	E	E	K	V	D	G	Y	N	T	R	I	F	K	Y	G	D	N	Y	.	Y	A	L	S	R	G	.
Template Known Secondary structure						S	S										.	.	.				S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S									S	S									T	T			.					T	T	.
Template Predicted Secondary structure																	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.							.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.																	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	T	G	E	D	I	T	S	N	V	R	T	I	R	A	I	P	L	K	L	H	G	E	N	I	P	A	R	L	E	V	R	G	E	V	F	L	P	Q	A	G	F	E	K	I	N	E	D	A	R	R	T	G	G	K	V	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	R	I	T	A	K	R
Query Conservation
Alig confidence																.	.							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	I	C	P	F	T	T	D	R	L	P	D	L	.	.	I	D	L	R	I	L	.	.	D	E	N	P	D	L	V	I	C	A	E	V	A	G	P	E	N	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	E	S	P	P	Y	V	K	E
Template Known Secondary structure		S		B												.	.							.	.				T	T										T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S				T	T			S
Template Predicted Secondary structure																.	.							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																												.	.	140	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		P	L	T	F	F	C	Y	G	V	G	V	L	E	G	G	E	L	P	D	T	H	L	G	R	L	L	Q	F	K	K	W	G	L	P	V	S	D	R	V	T	L	C	E	S	.	.	.	.	A	E	E	V	L	A	F	Y	H	K	V	E	E	D	R	P	T	L	G	F	D	I	D	G	V	V	I	K	V	N	S
Query Conservation																																														.	.	.	.
Alig confidence																				.																										.	.	.	.																		.	.	.	.	.	.
Template Conservation																				.																																															.	.	.	.	.	.
Template Sequence		D	V	Q	L	F	V	F	D	F	M	K	K	N	E	Q	G	F	L	.	S	Q	E	E	K	M	E	L	I	E	K	Y	N	L	P	H	V	E	I	L	G	R	F	T	A	S	E	E	G	I	K	K	I	K	E	I	L	K	R	F	N	E	E	G	R	E	.	.	.	.	.	.	G	V	V	F	K	E	D	S
Template Known Secondary structure		S											T	T			S			.													T			B									S	S																	T	T			.	.	.	.	.	.							S	S
Template Predicted Secondary structure																				.																																															.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions