Job Description P15042 Confidence 98.48% Date Thu Jan 5 11:34:23 GMT 2012 Rank 32 Aligned Residues 70 % Identity 19% Template c3l3eA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1; PDBTitle: crystal structure of the sixth brct domain of human topbp1 Resolution 1.26 Å

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		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.				.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		P	F	A	G	K	T	V	V	L	T	G	S	L	S	Q	M	S	R	D	D	A	K	A	R	L	V	E	L	G	A	K	V	A	G	S	V	S	K	K	T	D	L	V	I	A	G	E	A	A	G	S	.	.	.	K	L	A	K	A	Q	E	L	G	I	E	V	I	D	E	A	E	M	L	R
Query Conservation																																																					.	.	.
Alig confidence																	.																																				.	.	.
Template Conservation																	.
Template Sequence		P	L	H	K	V	V	V	C	V	S	K	K	L	S	K	.	K	Q	S	E	L	N	G	I	A	A	S	L	G	A	D	Y	R	R	S	F	D	E	T	V	T	H	F	I	Y	Q	G	R	P	N	D	T	N	R	E	Y	K	S	V	K	E	R	G	V	H	I	V	S	E	H	W	L	L	D
Template Known Secondary structure		T	T	T	T							G	G	G	G	G	.	G											T	T					S	S			T	T										T	T												T	T
Template Predicted Secondary structure																	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions