Job Description P15042 Confidence 97.06% Date Thu Jan 5 11:34:23 GMT 2012 Rank 73 Aligned Residues 186 % Identity 16% Template c3kyhC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:mrna-capping enzyme subunit alpha; PDBTitle: saccharomyces cerevisiae cet1-ceg1 capping apparatus Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																						.	.	.	.	.												.	.	.
Query SS confidence																						.	.	.	.	.												.	.	.
Query Sequence		T	W	C	C	E	L	K	L	D	G	L	A	V	S	I	L	Y	E	N	G	.	.	.	.	.	V	L	V	S	A	A	T	R	G	D	G	.	.	.	T	T	G	E	D	I	T	S	N	V	R	T	I	R	A	I	P	L	K	L	H	G	E	N	I	P	A	R	L	E	V	R	G	E	V	F	L	P	Q	A	G
Query Conservation																						.	.	.	.	.												.	.	.
Alig confidence																						.	.	.	.	.												.	.	.									.	.	.	.																										.	.	.	.
Template Conservation																																																	.	.	.	.																										.	.	.	.
Template Sequence		D	Y	Y	V	C	E	K	T	D	G	L	R	V	L	M	F	I	V	I	N	P	V	T	G	E	Q	G	C	F	M	I	D	R	E	N	N	Y	Y	L	V	N	G	F	R	F	P	R	.	.	.	.	L	P	Q	K	K	K	E	E	L	L	E	T	L	Q	D	G	T	L	L	D	G	E	L	V	I	.	.	.	.
Template Known Secondary structure											S											T	T	T										S	S	S													.	.	.	.		S	S			S	S	G	G	G	T					S										.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.																										.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	K	I	N	E	D	A	R	R	T	G	G	K	V	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	R	I	T	A	K	R	P	L	T	F	F	C	Y	G	V	G	V	L	E	G	.	G	E	L	P	D	T	H	L	G	R	L	L	Q	F	K	K	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	N	P	M	T	K	L	Q	E	L	R	Y	L	M	F	D	C	L	A	I	N	G	R	C	L	T	Q	S	P	T	S	S	R	L	A	H	L	G	K	E	F	F	K	P	Y	F	D	L	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T																T	T				S	S	S	B											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																															136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
					249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.	.																																																												.	.
Query SS confidence		.	.	.																																																												.	.
Query Sequence		.	.	.	W	G	L	P	V	S	D	R	V	T	L	C	E	S	A	E	E	V	L	A	F	Y	H	K	V	E	E	D	R	P	T	L	G	F	D	I	D	G	V	V	I	K	V	N	S	L	A	Q	Q	E	Q	L	G	F	V	A	R	A	P	.	.	R	W	A	V	A	F	K	F	P	A	Q	E	Q	M	T	F
Query Conservation		.	.	.																																																												.	.
Alig confidence		.	.	.																															.																		.	.	.	.	.	.	.	.	.			.	.
Template Conservation																																			.																		.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	P	N	R	C	T	T	F	P	F	K	I	S	M	K	H	M	D	F	S	Y	Q	L	V	K	V	A	K	S	L	D	K	.	L	P	H	L	S	D	G	L	I	F	T	P	V	K	A	P	Y	.	.	.	.	.	.	.	.	.	T	A	G	G	K	D	S	L	L	L	K	W	K	P	E	Q	E	N	T	V
Template Known Secondary structure				S	T	T		S				S										G	G	G									T	T	.		S	S										S	S	S	B		.	.	.	.	.	.	.	.	.		S	S	S											T	T	T
Template Predicted Secondary structure																																			.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.										.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	D	V	E	F	Q	V	G	R	T	G	A	I	T	P	V	A	R	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	D	F	K	L	I	L	D	I	P	Y	D	V	K	P	V	F	S	L
Template Known Secondary structure		.	.												S
Template Predicted Secondary structure		.	.
Template SS confidence
				257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions