 |
Job Description | P15042 | Confidence | 42.28% | Date | Thu Jan 5 11:34:23 GMT 2012 |
Rank | 406 | Aligned Residues | 30 |
% Identity | 23% | Template | c3iz5h_ |
PDB info |
PDB header:ribosome | Chain: H: PDB Molecule:60s ribosomal protein l7a (l7ae); |
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
|
Resolution | 5.50 Å |
|
  |   |
632 | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 650 | . | . | . | . | . | . | . | . | . | 660 | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | K | K | T | D | L | V | I | A | G | E | A | A | G | S | K | . |
. |
. |
. |
. |
L | A | K | A | Q | E | L | G | I | E | V | I | D |
Query Conservation |   |
|
|
|
|
|   |   |
|
|   |
|   |   |   |
|
|
| . | . | . | . | . |
|   |
|
|   |   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|
Template Sequence |   |
M | H | N | R | T | Y | C | A | E | I | A | H | N | V | S | T | R | K | R | K | E | I | V | E | R | A | A | Q | L | D | I | V | V | T | N |
Template Known Secondary structure |   |
 |  | T | T | S |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S | S |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|